Gene Information

Name : Plabr_4248 (Plabr_4248)
Accession : YP_004271843.1
Strain : Planctomyces brasiliensis DSM 5305
Genome accession: NC_015174
Putative virulence/resistance : Resistance
Product : phosphonate-transporting ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.28
Position : 5266433 - 5267206 bp
Length : 774 bp
Strand : +
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: rba:RB11030 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: phosphonate-transporting ATPase; SMART: ATPase, AAA+ t

DNA sequence : 
ATGAGTAATCCAGCGCCTCCCCTGCGAGCCGTCAGTCTGTCGAAACGGTACCGCCAGGGAACAGATGTCGTACATGCGTT
GCAGAACTTTGATCTGACACTTCAGGCGGGAGAGTTTCTGGCGATCATGGGAGCCAGCGGATCGGGCAAAAGCACGCTCA
TGCACTTGCTGGCCGGATTGACACATCCCGATGAAGGCAGCGTGTTTGTTGAAGAGCAGGAACTGGCGAAGCTTTCCGAT
GCGGAATTGACCCGTTTCCGGCGTCGTCGCATCGGCCTGGTTTTTCAGGCTCTGAATCTGATTCCTTCGCTGAACGTCGA
CGAAAACATCTCCATTCCACTGCAGGCCGACGGAGCAGGCAAAGATGCATACGCCCGCATCGATGAACTGGTCGATCGCC
TCGGCCTGTCAGGCCGTCGTAAGCATCGCCCTTACGCCATGAGCGGCGGCGAGCAACAACGCGTCGCCATCGCCCGCGCG
CTGGTTTACGATCCAGCTTTGATTCTGGCCGATGAACCGACCGGTAACCTCGATTCGGTCAACAGCAGAAACATCTGCCA
GATTCTCCGGGAGCTGAACCAGCAGGAGAAACGTTCGATTATTGTCGTGACGCACGAACCGGAGGTGGCCATGTGGGCTG
ACAGGATCGTGGTCCTGAAAGATGGCGAATTGCTGAGCGAACTTCACACCGCGGATTTCGACAGCGCACACGCTCTGGCG
TTGGCCTATCACGAAATGGTCGAATCGGCTGAACAGGGAGAGCTGACCGCGTGA

Protein sequence : 
MSNPAPPLRAVSLSKRYRQGTDVVHALQNFDLTLQAGEFLAIMGASGSGKSTLMHLLAGLTHPDEGSVFVEEQELAKLSD
AELTRFRRRRIGLVFQALNLIPSLNVDENISIPLQADGAGKDAYARIDELVDRLGLSGRRKHRPYAMSGGEQQRVAIARA
LVYDPALILADEPTGNLDSVNSRNICQILRELNQQEKRSIIVVTHEPEVAMWADRIVVLKDGELLSELHTADFDSAHALA
LAYHEMVESAEQGELTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-29 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Plabr_4248 YP_004271843.1 phosphonate-transporting ATPase CP001581.1.gene798.p Protein 5e-43 47
Plabr_4248 YP_004271843.1 phosphonate-transporting ATPase CP001581.1.gene598.p Protein 5e-42 45
Plabr_4248 YP_004271843.1 phosphonate-transporting ATPase NC_012469.1.7686878. Protein 3e-40 45
Plabr_4248 YP_004271843.1 phosphonate-transporting ATPase NC_008702.1.4606598. Protein 4e-35 43