|
Name : Plabr_4163 (Plabr_4163) Accession : YP_004271759.1 Strain : Planctomyces brasiliensis DSM 5305 Genome accession: NC_015174 Putative virulence/resistance : Unknown Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1004 EC number : 1.1.1.22 Position : 5147356 - 5148711 bp Length : 1356 bp Strand : - Note : COGs: COG1004 UDP-glucose 6-dehydrogenase; InterPro IPR017476: IPR001732: IPR014026: IPR014027; KEGG: plm:Plim_3736 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisatio DNA sequence : ATGAAAATTGTTGTGATCGGTACCGGCTACGTTGGTCTCGTGACGGGAACCTGTTTCGCTGACAGTGGAAACGACGTCGT CTGTGTTGATGTCAACGCGGACAAGATTGCGATGTTGAATCGCGGGGAAATACCGATCTACGAGCCAGGTCTTGCGGATC TGGTTGCGAGAAACAGAGAAGCCGGTCGTTTGCGATTTACGACGGATGTCTCCGAGTGTGTGCCGCAGGCTCAGATTGTG TTTCTCGCCGTCGGCACTCCGATGGACGAGGACGGCTCGGCCGATTTGACCGGTATCTGGGGGGCGGCTGACAGTATTGC CCCGTATCTCGCGTCGGAAACCGTAGTGGTTTGCAAGAGCACTGTCCCAGTCGGGACGAACCGTCGTCTTCTTGAACGCT TTCAGGCATTGCTTGGCCGAGAAGTCCGTGTCGCTTCAAACCCGGAATTTCTAAAAGAGGGCTGTGCGATTTCCGATTTC ACGAAGCCAGATCGTGTTGTGGTCGGAGTGGAAAGTGAGGATGTTGGCGACTTGATGCGGGAGCTTTATAAACCGTTTCT CAGAACAGAGCATCCGCTGCTGGTGATGGGGCTCGAGAGTGCGGAGATGACCAAGTATGTCGCCAACTGTATGCTGGCGA CGAAAATCAGCTTCATCAACGAAATGGCAAACCTGGCCGAATGTGTTGGAGCGGACATCAACGACGTTCGCAAGGGGATC GGGCACGATCAGCGCATCGGTTTTCAATTTCTGTTTCCCGGCGTTGGATACGGCGGATCCTGTTTCCCCAAAGATGTGAA AGCCCTGATTCATACCGCCCGGGAACACGGCATGATGCCGGAATTGCTCGATTCGGTGGATGAGGTCAATCGGCGTCAGA AATCGGTCCTGTTCCGTAAACTCAACGAGTACTTTACCGGGGACCTGGAAGGCAAAACGGTCGCCATCTGGGGGCTGGCG TTCAAGCCCCGAACGGATGATATTCGGGAAGCTCCCGCTCTGACGCTTATCGATCAACTGCTCGAGGCAGGGGCGAATGT GCGAGCTCACGATCCGGTGGCGATGGACAATGTTTCTCGGCAATACGAGGATCGAATCGAGTTATTCATTCACCAGTACG AGGCGTTGAATGACGCCGATGTGCTCGTTATCTGCACCGAATGGAACGAATACCGTTCGCCCGACTTCGATGAGATTCGC AGCCGACTCCGGGACTCCGTGATCTTTGATGGTCGGAACCTCTTTGATCCGAAGCAGATGAAAAAGCAGGGCTTCTTTTA CTCCGGAATTGGAATTGTTCCGGTCGAAAACGCGATGCAAGCGTCTTCGACCGCTCCGGACCTGGCGACAAATTAG Protein sequence : MKIVVIGTGYVGLVTGTCFADSGNDVVCVDVNADKIAMLNRGEIPIYEPGLADLVARNREAGRLRFTTDVSECVPQAQIV FLAVGTPMDEDGSADLTGIWGAADSIAPYLASETVVVCKSTVPVGTNRRLLERFQALLGREVRVASNPEFLKEGCAISDF TKPDRVVVGVESEDVGDLMRELYKPFLRTEHPLLVMGLESAEMTKYVANCMLATKISFINEMANLAECVGADINDVRKGI GHDQRIGFQFLFPGVGYGGSCFPKDVKALIHTAREHGMMPELLDSVDEVNRRQKSVLFRKLNEYFTGDLEGKTVAIWGLA FKPRTDDIREAPALTLIDQLLEAGANVRAHDPVAMDNVSRQYEDRIELFIHQYEALNDADVLVICTEWNEYRSPDFDEIR SRLRDSVIFDGRNLFDPKQMKKQGFFYSGIGIVPVENAMQASSTAPDLATN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| udgA | YP_005682185.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 2e-48 | 41 |
| udgA | YP_003784334.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 2e-48 | 41 |
| udgA | YP_005686369.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 2e-48 | 41 |
