Gene Information

Name : Plabr_3126 (Plabr_3126)
Accession : YP_004270745.1
Strain : Planctomyces brasiliensis DSM 5305
Genome accession: NC_015174
Putative virulence/resistance : Resistance
Product : polyamine-transporting ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.31
Position : 3803658 - 3804389 bp
Length : 732 bp
Strand : +
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: rba:RB4309 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: polyamine-transporting ATPase; SMART: ATPase, AAA+ type

DNA sequence :
ATGGCTCTGGTGGAAATTCGCAATCTGACGAAATCGTTCTCGAAGGGGGAAGAGAAAATCACCCCCCTGCGGGACGCCGA
TCTGGATATCCACGAAGGCGATTTTGTTTCGCTGATGGGCCCGAGCGGGACAGGCAAAAGCACGCTGCTGAACCTGATCA
GCGGAATTGACAAGCCGGATCAGGGAACAGTCACCGTCGACGGCGTGGAGGTAACAAAACTTTCACGCAGCAAACTGGCG
GACTGGCGCGCGGCCAATCTGGGGTACATCTTTCAGACGCATAACCTGATTCCAGTGCTCACGGCTTACGAAAACATTGA
ACTGCCGGTGCTGCTACTGCCGTTGACCGCGGCTGAACGTCGCCGTCGTGTCGAAATTGCGCTGGAAGCGGTCGGCTTGA
CCGATCGTGCAGATCATTATCCGAGACAGATGTCCGGGGGGCAGGAACAGCGCGTCGGTATCGCCCGGGCGATTGTGGCT
CACCCCAAAGTGGTGGTGGCTGATGAACCGACCGGAAGTCTCGATAACAAAACCAGTGACCAGATTCAGGTGCTGCTGCA
ACGGCTTAACAGTGAGCTCAATATCACCCTGGTGATGGTGACGCATGACCGGGAAGCGGCGGAAATCGCGTCGCGTCAAT
TGTTGCTGGACGACGGCCAGATTCTGGAGCAATCCAGCGATGGTGCAAAAGCGGCGTCGCATCACGCGGTTGCGGTAGCG
GGAGGGAAATGA

Protein sequence :
MALVEIRNLTKSFSKGEEKITPLRDADLDIHEGDFVSLMGPSGTGKSTLLNLISGIDKPDQGTVTVDGVEVTKLSRSKLA
DWRAANLGYIFQTHNLIPVLTAYENIELPVLLLPLTAAERRRRVEIALEAVGLTDRADHYPRQMSGGQEQRVGIARAIVA
HPKVVVADEPTGSLDNKTSDQIQVLLQRLNSELNITLVMVTHDREAAEIASRQLLLDDGQILEQSSDGAKAASHHAVAVA
GGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-36 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-37 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Plabr_3126 YP_004270745.1 polyamine-transporting ATPase NC_008702.1.4606598. Protein 1e-42 46
Plabr_3126 YP_004270745.1 polyamine-transporting ATPase NC_012469.1.7686878. Protein 2e-44 43