|
Name : Plabr_0003 (Plabr_0003) Accession : YP_004267657.1 Strain : Planctomyces brasiliensis DSM 5305 Genome accession: NC_015174 Putative virulence/resistance : Unknown Product : D-xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : 5.3.1.5 Position : 2274 - 3584 bp Length : 1311 bp Strand : + Note : COGs: COG2115 Xylose isomerase; HAMAP: Xylose isomerase; InterPro IPR012307: IPR001998: IPR013452; KEGG: plm:Plim_1287 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; PRIAM: Xylose isomerase; SPTR: Xylose isomerase; TIGRFAM: Xylose isomerase, DNA sequence : ATGAGCTATTTTCCCGATGTTCCCACCATTCCCTTCGAAGGTCCTGAGAGTCGGAATCCGCTGGCATTCCGCTACTACAA TCCGGACGAAATGATCGAAGGTCAGTCGATGCGGGACCTGCTCCGCTTCAGTGTCTGCTACTGGCACACATTCCGCGGCA CGGGGGGAGATCCGTTCGGTCCGGGTACGGCGGTTCGTCCGTGGGAAGACGGCACCGATTCGGTCGACATGGCGGTCAAA CGGGTTGATGTCGCTTTTGAATTCATCTCCAAACTGGGCGTCGACTTCTACTGCTTCCACGACCGCGACGTGTCTCCGGA AGGTTCGTCACTCAAAGAAACGAACGGCAATCTCGACCGCGTCGTCGCTCGCTTGAAAGAAAAGCAGGAAGAGACCGGCA TTAAGCTGCTGTGGGGCACCGCGAATCTGTTCTCCAACCCCCGCTTCATGCACGGGGCCGCGACCAGCTGCAACGCCGAT GTCTTCGCCTATGCTGCCGCTCAGGTGAAAAAAGCGTTGGAAGTGACCAAAGAACTCGGTGGCCAGAACTACGTTTTCTG GGGCGGTCGCGAAGGCTACCAGAACCTGTTCAACACCGATATGAAACGGGAACTCGATCATCTGGCCCGATTCATGCACA TGGCTAAAGATTACGCCAAGAGCATCGGTTTCGATGGTCAGTTCCTGTTCGAACCCAAACCGAAAGAGCCAACCAAGCAC CAGTACGATTTCGATGTCGCCGCGTGCGTGAACTTCCTGCGTCAGTACGGCCTGGAAGACACGGTGAAGATGAATATCGA AACCAACCACGCCACGCTGGCTGGCCATTCCATGATGCACGAAATGGAATACGCCCGCATTCAGGACATGCTGGGCAGCA TCGACGCGAACACCGGCGACCTGCTGCTCGGCTGGGACACCGATCAGTTCCCCACCGATATTTATTTGACGACGCAGTGC ATGCTGGTCATTCTGAAACAGGGCGGCCTGAAGCCGGGCGGAATTAACTTTGACGCCAAAGTCCGTCGCGAAAGTTTCGA TCCAACGGACCTGTTCTATGCTCACATCGGCGGAATGGATGCATTCGCTCGCGGGGCCAAAATTGCCGCTGCCATTCGGG CAGACGGCGTGCTGGATGATTTCGTCAAAGACCGTTACTCGAGCTACGACAGCGGCGTTGGCCAGGAAATCGAAGACGGT TCGGCCAACTTCGAGTCGCTCAGCAAGTACATGCTCGACAAAGGCGAAGCGGACGCCAACACCAGCGGTCGTCAGGAATA TCTGGAAAATATCATCAATCTGTACGTCTAA Protein sequence : MSYFPDVPTIPFEGPESRNPLAFRYYNPDEMIEGQSMRDLLRFSVCYWHTFRGTGGDPFGPGTAVRPWEDGTDSVDMAVK RVDVAFEFISKLGVDFYCFHDRDVSPEGSSLKETNGNLDRVVARLKEKQEETGIKLLWGTANLFSNPRFMHGAATSCNAD VFAYAAAQVKKALEVTKELGGQNYVFWGGREGYQNLFNTDMKRELDHLARFMHMAKDYAKSIGFDGQFLFEPKPKEPTKH QYDFDVAACVNFLRQYGLEDTVKMNIETNHATLAGHSMMHEMEYARIQDMLGSIDANTGDLLLGWDTDQFPTDIYLTTQC MLVILKQGGLKPGGINFDAKVRRESFDPTDLFYAHIGGMDAFARGAKIAAAIRADGVLDDFVKDRYSSYDSGVGQEIEDG SANFESLSKYMLDKGEADANTSGRQEYLENIINLYV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 5e-108 | 55 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 4e-108 | 55 |
