Gene Information

Name : Plabr_2124 (Plabr_2124)
Accession : YP_004269749.1
Strain : Planctomyces brasiliensis DSM 5305
Genome accession: NC_015174
Putative virulence/resistance : Virulence
Product : phosphonate-transporting ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.28
Position : 2497224 - 2497937 bp
Length : 714 bp
Strand : -
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: plm:Plim_3482 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: phosphonate-transporting ATPase; SMART: ATPase, AAA+ typ

DNA sequence : 
ATGAAATACGCCGCCCGACTGATTGATCTGACAAAGCATTACCACCTGGGTGGGGATGTCGTAGTGAAAGCGTTGCGAGG
CGTTTCGCTGGATATTCCTGAAGGGGAATTCCTGGCGATCATGGGTTCATCCGGAAGCGGTAAGAGTACCATGCTGAATC
TGATGGGGGCACTCGATCGGCCCACGTCTGGTTCGTATCTGCTGGCGGGAAACGATGTTTCGCAGATGGACGACAGCGAG
CTGTCAGCCATTCGCAACAAACTGATCGGCTTCATCTTTCAGTCGTTCAATCTGATTCCTCAATACACCGTGCTCGAAAA
CATCCTGCTGCCATTGCAGTATCGCACCAGTCGCGAACCGATTGGTGAGGTGGATGAAGCCAAAGCGGTGGAACTCGCCC
AGATGGTCGGGCTGGGGGATCGTCTCGATCACAAGCCTTTCCAGCTTTCCGGGGGACAACAGCAGCGTGTCGCCATCGCC
CGCGCTCTGGTCAATGACCCGCAGATCATCATGGCGGACGAACCGACTGGAAACCTGGATTCAGCCACCGGTGAAGAGAT
TATGCGTCTGCTGAACGAACTGAATGAACAGGGCCGTACGATCATCATGGTGACGCACGAGCCGGAAGTGGCCGCTCAGA
CGAAGTCGCAGATCTACATGAAAGATGGCGTTATCGCCGGCACCGGTATCTTCCCCGGCCACGCCGCGGTTTAA

Protein sequence : 
MKYAARLIDLTKHYHLGGDVVVKALRGVSLDIPEGEFLAIMGSSGSGKSTMLNLMGALDRPTSGSYLLAGNDVSQMDDSE
LSAIRNKLIGFIFQSFNLIPQYTVLENILLPLQYRTSREPIGEVDEAKAVELAQMVGLGDRLDHKPFQLSGGQQQRVAIA
RALVNDPQIIMADEPTGNLDSATGEEIMRLLNELNEQGRTIIMVTHEPEVAAQTKSQIYMKDGVIAGTGIFPGHAAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 4e-33 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-31 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Plabr_2124 YP_004269749.1 phosphonate-transporting ATPase NC_012469.1.7686878. Protein 3e-49 50
Plabr_2124 YP_004269749.1 phosphonate-transporting ATPase CP001581.1.gene598.p Protein 4e-39 47
Plabr_2124 YP_004269749.1 phosphonate-transporting ATPase NC_008702.1.4606598. Protein 9e-40 47
Plabr_2124 YP_004269749.1 phosphonate-transporting ATPase CP001581.1.gene798.p Protein 6e-39 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Plabr_2124 YP_004269749.1 phosphonate-transporting ATPase VFG0869 Protein 2e-24 41