|
Name : Sgly_0848 (Sgly_0848) Accession : YP_004265198.1 Strain : Syntrophobotulus glycolicus DSM 8271 Genome accession: NC_015172 Putative virulence/resistance : Unknown Product : type III restriction protein res subunit Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 823055 - 826045 bp Length : 2991 bp Strand : + Note : COGs: COG0610 type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterPro IPR014001: IPR007409: IPR006935; KEGG: nth:Nther_0797 protein of unknown function DUF450; PFAM: Restriction endonuclease, type I, R s DNA sequence : ATGAGCATAACAACAGAAAATACATTTGAAAGCGCATTAGTACAATCCCTTGTTGAACAGGGTGGTTACACAGAAGGAAA TGCCCCCGATTATAGTCCTGAACTTGGTATGTTTAAATATGAAGTGATTAAGTTTTTACAGGAATCCCAACCAAAACGGT GGGATAAAATTTATTCCATTCACGGAGAGGATGCTAATAATCGCGTCATTCAAAGATTATACAAGGAACTGGACTTAAGA GGCAGTCTGGATGTGCTTCGCAATGGCTTTGTTGATTACGGTGTGCGTTTTCAAATGGCCTTTTTTCAGCCTGCTTCGGG TTTAAACCCTGATGCAATTGATCTGTACAATAAAAACAGCCTGAAAGTCTATCGTCAAATTTTTTATAGCACCAAAAATA AAAACAGTTTAGATGTATTGCTTTCGCTCAACGGTATTCCTGTAGCTACTTTTGAACTTAAAAATCAATTTACAGGTCAG GATGTGGGCAATGCTTTAAAACAATACGCCAGCACCAGAGATAACAGAGAAATTCTTTTTGCTTTCAGGAAAAGATCTTT AGTGCATTTTGCTGTTGACCAGGATGAAGTATTTATGACCACCAAACTTGATGGGAGTAAAACCTATTGGCTACCATTCA ACAAAGGCGCAAACAGCGGTAAGGGCAATCCCTTAAATCCCAATGGATACCGCACGGCTTACTTGTGGGAAAATATTTTG CAAAAAGATAGTTGGATGGAAATAATTCAACGCTTTGTGCATTTGCAAACAGAAGAAATTGAAGTGGAAGGAAAAGTTTA TAAAAAAGAGAAATTGATATTTCCACGATATCATCAATTAGATGCAGTTAGGAGGATAAGCGAAAAGGTATTGGAAGTAG GGACTGGTAAAAACTATCTGATTCAACACTCCGCAGGTTCGGGAAAGAGTAACTCTATTGCTTGGTTGGTTTATCGTTTA TCGAGTTTGCACAACGCTACAGATGAACGGATTTTTGATTCTGTAATCGTTGTTACCGATAGAAAAGTTCTTGATCAACA GTTGCAAAACACTATTTATCAATTTGAACACAAAACAGGTGTAGTTCAAAAAATCGATAAAGACAGCTCGCAGTTAGCTT CTGCCTTGGGTTATGGGACGAACATCATCATTACTACTTTGCAAAAATTCCCTTTTGTAGTAGACAAGGTTGGAGAATTA CCGGATAGAAAATATGCCGTAATTATCGATGAAGCCCACAGCTCTCAAGGTGGCGAAGCAAGTAAAAAACTAAAAGAAGT ACTGGCTGAAAAATCATTGGAAAAAGCAGAAACAGAGGATACAGATGATTATAATGGTGATGATTTTGTAAGAGAGCAAA TTGAAAGGACGGCCGCATCAAGGGGGCAACAGCCTAATATTTCATTTTTTGCCTTTACCGCAACACCGAAATATAAAACC CTGCAAGTCTTTGGAGATAAGGATTCCGAGGGCAAACCAAAGCCATTCCATTTGTATTCCATGCGTCAAGCCATAGAGGA AGGTTTTATTTTAGATGTATTGCATTATTACGTCACTTATGAACTCTACTTTAAATTGACTAAAGCAATAAAAGAAGATC CGAATCTAAATAAGAAAAGAGCTGCCAAAGCAATTGGTAAATTCGTTTCCCTGCATCCTCACAACTTAGCTCAGAAGACC GAAATCATAATAGAGCATTTCAGAGAAATTGTTTCCAAAAAAATAGGAGGCAAAGCCAAAGCCATGTTGGTTTGTGGGTC AAGGCTTCACGCCAAACGTTATTTTGAGGAATTTAATAGATATATAAAGACCAAAGGGTATGCAAACGAAATAAAAATTT TGGTAGCCTTTTCAGGTAAAGTGACTGATGACAACTATCCTGATGGAGTTTCTGAACCTCAAATGACAGGATATGGAGAA AAAGAACTTCCAGCCATTTTTGATAAAGACGAATATAGAATATTAATAGTTGCAGACAAGTATCAAACCGGTTTTGACCA GCCCTTACTTCATACTATGTACGTTGACAAAAAGCTATCAGGTGTAAAAGCCGTTCAGACCTTATCAAGGCTCAACAGAA TACACCCCGGCAAAGAAGATACCTTCGTGCTTGATTTTGCCAATGATAGGCAAACCATTTTGGATTCATTTCAGCCTTAC TATGAGATCACTTCCGTAATAGAAGAAACTGATGTCAACCACTTATATGACCTTAAGGCCAGATTGGATGAATTCAAAAT ATACTGGAAAGAAGAAATAGAAGCATTTGCTAATATATATTTTGACCCAAAAACTAAACTAAACAATTCAAAACAACAAA AGCTTTTATACGCCTTTACTGATCCAGCTGTAGATAGATACAAAGACATTCCAGAACATGAAAGGCAAGATGAGTTCAAA AAAGGTTTACGTTCCTGGACAAATTTATACGCGTTCCTTTCTCAAATAATGCCCTTTTTTGATGCTGAATCTGAGAAGTT TTATGCTTATGCCAAGCTCTTACAAACAAGACTTCCAAGAAGAGGGCTCTCAGAATCATTGCAATTAGATGATGAAGTCG CTTTAGAATATTATCGTTTGCAAAAGATAAAGGAAGGTTCTATTGAACTTCAAAAAGGTGAAGAAGGCGAATTAAGTGGA ACATCAGAAGCAGGACTGAAAAGAGCTAAAGAGGAAAAAGCCTTGCTTTCCGAAATTATTAATATGCTTAATGAACAATT CGGAACAGAATTTGATGAAGCCGATAATTTATTCTTTGATCAAATTGAAGCTGAATTAATGGAAGATGAAACCTTACAGA CACAAGCAAAAGTTAATAAGATAGACACTTTTAAATTTGCTTTCGATGATAAGTTTATAGATAAATTAATCGGAAGAATG GATCAGAATCAGGAAATCTTTGAAAAAATACTGGAGGATAAAGCCTTTGGTGATTTAGTTAAACAATTAATGATGAAAAA AATCTATAGGCGAATGAATGAACTGGTTTAG Protein sequence : MSITTENTFESALVQSLVEQGGYTEGNAPDYSPELGMFKYEVIKFLQESQPKRWDKIYSIHGEDANNRVIQRLYKELDLR GSLDVLRNGFVDYGVRFQMAFFQPASGLNPDAIDLYNKNSLKVYRQIFYSTKNKNSLDVLLSLNGIPVATFELKNQFTGQ DVGNALKQYASTRDNREILFAFRKRSLVHFAVDQDEVFMTTKLDGSKTYWLPFNKGANSGKGNPLNPNGYRTAYLWENIL QKDSWMEIIQRFVHLQTEEIEVEGKVYKKEKLIFPRYHQLDAVRRISEKVLEVGTGKNYLIQHSAGSGKSNSIAWLVYRL SSLHNATDERIFDSVIVVTDRKVLDQQLQNTIYQFEHKTGVVQKIDKDSSQLASALGYGTNIIITTLQKFPFVVDKVGEL PDRKYAVIIDEAHSSQGGEASKKLKEVLAEKSLEKAETEDTDDYNGDDFVREQIERTAASRGQQPNISFFAFTATPKYKT LQVFGDKDSEGKPKPFHLYSMRQAIEEGFILDVLHYYVTYELYFKLTKAIKEDPNLNKKRAAKAIGKFVSLHPHNLAQKT EIIIEHFREIVSKKIGGKAKAMLVCGSRLHAKRYFEEFNRYIKTKGYANEIKILVAFSGKVTDDNYPDGVSEPQMTGYGE KELPAIFDKDEYRILIVADKYQTGFDQPLLHTMYVDKKLSGVKAVQTLSRLNRIHPGKEDTFVLDFANDRQTILDSFQPY YEITSVIEETDVNHLYDLKARLDEFKIYWKEEIEAFANIYFDPKTKLNNSKQQKLLYAFTDPAVDRYKDIPEHERQDEFK KGLRSWTNLYAFLSQIMPFFDAESEKFYAYAKLLQTRLPRRGLSESLQLDDEVALEYYRLQKIKEGSIELQKGEEGELSG TSEAGLKRAKEEKALLSEIINMLNEQFGTEFDEADNLFFDQIEAELMEDETLQTQAKVNKIDTFKFAFDDKFIDKLIGRM DQNQEIFEKILEDKAFGDLVKQLMMKKIYRRMNELV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAS0025 | YP_042158.1 | type I restriction enzyme protein | Not tested | SCC476 | Protein | 0.0 | 44 |
