Gene Information

Name : Sgly_0830 (Sgly_0830)
Accession : YP_004265182.1
Strain : Syntrophobotulus glycolicus DSM 8271
Genome accession: NC_015172
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 801351 - 801995 bp
Length : 645 bp
Strand : -
Note : COGs: COG1131 ABC-type multidrug transporter ATPase component; InterPro IPR003593: IPR003439; KEGG: cpr:CPR_0053 antibiotic ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: bacitracin transport ATP-bin

DNA sequence :
ATGGAGAATATAAAAGTTGTAGAAATTTCCAACTTAACAAAAGATATAAAAGGCACAAAGGTACTTAATAACGTTAGTTT
AGGTCTTGAAAGTGGTAAGGCATATGGAATAGTTGGTAGAAATGGCTCTGGTAAGAGTATGCTTTTTAAAGCTGTTTGTG
GCTTAATTAACATAACTGAAGGTGAAATAAAGGTATTTGATAAGCCTATTAAGAATGGCAGCTTCCCTGATAGCACAGGC
ATAATCATTGAAAACCCAGGGTTCCTACTTCAATATTCTGCTTTCAAAAACTTAAAGATACTAGCTAGTATAAATAATAC
AATAAGCGATGAAAAAATAAATGAAACCATTGCTTTAGTTGGATTAGATCCTAACAATAAAAAACCAGTAAGAAAATACT
CTTTAGGTATGAAACAAAGATTAGGTATTGCACAAGCGCTTATGGAAGAACCTAAACTATTAATACTTGATGAACCAATG
AATGGTCTTGACTCAGAAGGTGTAAAGAAAATTAGAGAACTTCTTTTAGAACTTAAATCTAAATCTGTTACAATTCTATT
AGCAAGTCATAACAGTGAAGATATAAACGAGATATGTGATTATGTATATAGTATGGAAAATGGAGTTTTGAGTAAAAGCG
TATAA

Protein sequence :
MENIKVVEISNLTKDIKGTKVLNNVSLGLESGKAYGIVGRNGSGKSMLFKAVCGLINITEGEIKVFDKPIKNGSFPDSTG
IIIENPGFLLQYSAFKNLKILASINNTISDEKINETIALVGLDPNNKKPVRKYSLGMKQRLGIAQALMEEPKLLILDEPM
NGLDSEGVKKIRELLLELKSKSVTILLASHNSEDINEICDYVYSMENGVLSKSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 2e-24 43
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 2e-24 43
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 2e-24 43
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 2e-24 43