Gene Information

Name : Sgly_0007 (Sgly_0007)
Accession : YP_004264389.1
Strain : Syntrophobotulus glycolicus DSM 8271
Genome accession: NC_015172
Putative virulence/resistance : Unknown
Product : pyridoxal phosphate synthase yaaD subunit
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 8619 - 9506 bp
Length : 888 bp
Strand : +
Note : COGs: COG0214 pyridoxine biosynthesis enzyme; HAMAP: Vitamin B6 biosynthesis protein; InterPro IPR001852; KEGG: drm:Dred_0617 pyridoxal biosynthesis lyase PdxS; PFAM: Vitamin B6 biosynthesis protein; SPTR: pyridoxine biosynthesis protein; TIGRFAM: Vitamin

DNA sequence :
ATGGGAACAGAGACAGGCTCTTGGAAAGTAAAGACCGGCTTGGCAGAAATGCTTAAGGGCGGAGTAATAATGGATGTGAC
GACACCGGAGCAAGCTAAAATAGCCGAGGAAGCCGGAGCTTGCGCTGTCATGGCACTGGAAAGAGTACCGGCCGATATCC
GGGCAGCCGGCGGGGTAGCCAGGATGGCCGATCCAACCATTATCAAAAGGATTATGGAGGTTGTCACCATTCCGGTCATG
GCCAAGGCCAGAATCGGGCATTTTGTTGAAGCTCAGGTCTTGGAGGCATTAGGAGCGGACTATATTGACGAAAGCGAAGT
GCTGACTCCGGCGGACGACCTCTATCATATTAATAAGCATGATTTTAAAGTTCCTTTTGTTTGTGGTGCCCGCAATCTGG
GAGAGGCACTTCGCCGGATCGCCGAAGGTGCGGCAATGATCAGAACGAAAGGCGAACCCGGAACAGGAAATGTCGTTGAA
GCAGTCAGACATATGCGGGCAGTAATGGCCGATATTCGTCGATTATCCAATATGCCTCAAGAGGAATTAATGACCGCGGC
GAAAGAAATGGGTGCTCCTTATGACCTGGTCTTAGCTGTGGCTGAAAACGGCAAATTGCCTGTCGTCAATTTTGCAGCGG
GCGGTATTGCCACCCCGGCTGACGCAGCTTTAATGATGCAATTGGGCTGTGATGGTGTATTTGTCGGTTCCGGTATTTTC
AAATCGGCCGATCCCGCCAAAAGGGCCAGGGCAATTGTTTTGGCGACAACTCATTATAAGGATGCGGCGATGCTGGCTGA
GCTTTCGGAAGATCTCGGCGAAGCAATGCCCGGCTTAGAAATTTCCACAATTTCGGACTCTGAAAGAATGCAGGAGCGTG
GCTGGTAA

Protein sequence :
MGTETGSWKVKTGLAEMLKGGVIMDVTTPEQAKIAEEAGACAVMALERVPADIRAAGGVARMADPTIIKRIMEVVTIPVM
AKARIGHFVEAQVLEALGADYIDESEVLTPADDLYHINKHDFKVPFVCGARNLGEALRRIAEGAAMIRTKGEPGTGNVVE
AVRHMRAVMADIRRLSNMPQEELMTAAKEMGAPYDLVLAVAENGKLPVVNFAAGGIATPADAALMMQLGCDGVFVGSGIF
KSADPAKRARAIVLATTHYKDAAMLAELSEDLGEAMPGLEISTISDSERMQERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 2e-88 69
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-88 69
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-88 68