Gene Information

Name : Sgly_0606 (Sgly_0606)
Accession : YP_004264970.1
Strain : Syntrophobotulus glycolicus DSM 8271
Genome accession: NC_015172
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 592714 - 593466 bp
Length : 753 bp
Strand : +
Note : COGs: COG1338 flagellar biosynthesis pathway component FliP; InterPro IPR005838: IPR005837; KEGG: dhd:Dhaf_4138 flagellar biosynthesis protein FliP; PFAM: type III secretion system inner membrane P protein; SPTR: flagellar biosynthetic protein FliP; TIGRF

DNA sequence :
ATGATCTTGCGAAAAAAAGAAAATATTTTGGCGGTATTCTTTATTTTGGTGAGCCTCTTGCTGCTCTTACCGCAGGGAGT
CCGGGCGGCGGGGATTAACCTTGATCTTGGCAATACTCCTGTAGAACAAACCAGTTCCGCCATCCAGATATTTTTGATCA
TGACGGTGCTGTCACTGGTACCGGCCATCCTGGTACTCATGACTTCCTTCACCCGTATTATTGTGGTTCTCTCCTTTGTC
CGCAATGCGATGGGTACTCAGCAGCTTCCTCCCAATCAGGTCATTATCGGTTTAGCGCTGATTTTAACCTTCTTTGTGAT
GGCCCCTACTTTTTCTCAGGTCAACACCAATGCCATAAAACCGTATATTGAGAATCAGATCAGCAGGGAAGAGGCTTTGA
CAAGGGCTGAGGCACCGCTGAGAGAATTTATGATCAAGCAGACCAGAGAGAAAGACCTGGCTCTATTTGTGGGACTGTCC
CAGATTCCTCAGCCGAAGACTTATCGCGATATCCCTACTTATGTTCTGGTGCCGTCCTTTGTGATCAGTGAACTGAAAAC
CGCTTTCCAGATCGGTTTTGCTATTTTTATTCCTTTTATGATTATTGACATGATTGTCGCCAGTACGTTAATGTCGATGG
GCATGATGATGCTGCCGCCAATGATGATCTCCCTTCCGTTTAAGATCTTATTGTTTGTTATTGTAGACGGATGGTATCTG
ATCGTGCAGTCCCTTGTTGCCAGCTTTAAGTGA

Protein sequence :
MILRKKENILAVFFILVSLLLLLPQGVRAAGINLDLGNTPVEQTSSAIQIFLIMTVLSLVPAILVLMTSFTRIIVVLSFV
RNAMGTQQLPPNQVIIGLALILTFFVMAPTFSQVNTNAIKPYIENQISREEALTRAEAPLREFMIKQTREKDLALFVGLS
QIPQPKTYRDIPTYVLVPSFVISELKTAFQIGFAIFIPFMIIDMIVASTLMSMGMMMLPPMMISLPFKILLFVIVDGWYL
IVQSLVASFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 9e-21 42
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 9e-21 42
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 9e-21 42
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 5e-22 41
lscR AAO18040.1 LscR Virulence TTSS locus Protein 2e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sgly_0606 YP_004264970.1 flagellar biosynthetic protein FliP VFG2338 Protein 8e-45 56
Sgly_0606 YP_004264970.1 flagellar biosynthetic protein FliP VFG2494 Protein 7e-46 56
Sgly_0606 YP_004264970.1 flagellar biosynthetic protein FliP VFG1259 Protein 1e-48 55
Sgly_0606 YP_004264970.1 flagellar biosynthetic protein FliP VFG2016 Protein 2e-46 52
Sgly_0606 YP_004264970.1 flagellar biosynthetic protein FliP VFG0188 Protein 2e-24 42
Sgly_0606 YP_004264970.1 flagellar biosynthetic protein FliP VFG0044 Protein 9e-26 41