Gene Information

Name : Sgly_3113 (Sgly_3113)
Accession : YP_004267381.1
Strain : Syntrophobotulus glycolicus DSM 8271
Genome accession: NC_015172
Putative virulence/resistance : Unknown
Product : hydroxymethylbilane synthase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 3163523 - 3164440 bp
Length : 918 bp
Strand : -
Note : COGs: COG0181 porphobilinogen deaminase; HAMAP: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; InterPro IPR000860; KEGG: dhd:Dhaf_3354 porphobilinogen deaminase; PFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; SPTR: porphobilinoge

DNA sequence : 
ATGAAAACCATTCGCATTGGCACAAGAGAAAGTAAGCTTGCCATCTGGCAGGCCGAGTGGGTCAAGGATTCCTTGACATC
GATTTATCCCGGGATAGACTGCGTCTTAGTCCCGAAGAAAACGAAAGGGGATAAAATTCCTGATATTCCGCTGCCCAAGA
TTGGGGACAAGGGATTTTTTACCGAGGAGCTGGAACAGGCTTTATTGACCGGAGAAATAGACCTGGCGGTGCACAGCCTG
AAAGATCTTCCTGTTGAATTGCCCCAGGGCCTGAGTATTGCCGCTTACGGGGAACGCCATGATCCCAGAGACGTATTCTT
TGGTAAAGAAGGGCTTCCTCTGGCTGAATTGCCCGCCGGGTCGATGATCGGAACCAGCAGTTTAAGACGGCAGTGTCAAT
TAAAATATCAGAGGGCGGACCTCAATTTCTGCGATCTGCGGGGGAATCTGGATACACGCTGGGACAAGCTGCAAAATTCC
CGGGATATGGCCGGGATTGTACTGGCGGCAGCCGGTGCGCTGCGTTTGGGCTGGCAGGACCGGATCACGGAATTTCTGGC
TGAAGATGTTGTCCTGCCTGCTGTCGGCCAGGGGATCATTGCCATTGAGACAGCATCGCACAGAACAGAGATCAGGCAAA
TACTCCAGCCTCTTAACCACAGGCCTTCGGAATTGGCCGGACGGGCAGAACGTTCTTTTTTGAGAAGCCTGGGAGGGGGA
TGTCAGACTCCGATTGCCGCTTTGGCTAAAGTTCAGGAGGATAGGATACAAGTCACCGGTATGGTTGCCGGTATGGACGG
CAAAAATATTTTAAAGGTGACGGCAGAGGGCTTTGATCCTGAACAGACAGGAGCAGACGCCGCCGCCCAAATCAAATGTT
TAGGCGCGAATAATCTATTAAAGGAGATCCAGGGATAA

Protein sequence : 
MKTIRIGTRESKLAIWQAEWVKDSLTSIYPGIDCVLVPKKTKGDKIPDIPLPKIGDKGFFTEELEQALLTGEIDLAVHSL
KDLPVELPQGLSIAAYGERHDPRDVFFGKEGLPLAELPAGSMIGTSSLRRQCQLKYQRADLNFCDLRGNLDTRWDKLQNS
RDMAGIVLAAAGALRLGWQDRITEFLAEDVVLPAVGQGIIAIETASHRTEIRQILQPLNHRPSELAGRAERSFLRSLGGG
CQTPIAALAKVQEDRIQVTGMVAGMDGKNILKVTAEGFDPEQTGADAAAQIKCLGANNLLKEIQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 6e-56 46
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 6e-56 46