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Name : Sgly_3011 (Sgly_3011) Accession : YP_004267281.1 Strain : Syntrophobotulus glycolicus DSM 8271 Genome accession: NC_015172 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 3056631 - 3058469 bp Length : 1839 bp Strand : - Note : COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003781: IPR003869; KEGG: dsy:DSY3347 hypothetical protein; PFAM: polysaccharide biosynthesis protein CapD-like; CoA-binding; SPTR: uncharacterized protein; PFAM: polysaccharide biosynthesis DNA sequence : GTGTCCCATCCTAAACGAACAGTATTTTTGATGTTTTTTGATGCGATTCTGATCAACCTGGCGCTTTTCGGCAGCTTTTA CCTGCGCTTAGCGATTGAGGAAAACAGTTCCGTTTCAACGGATTATTACTCTACATATATTGATGCTGCCGTATTTGCGA CAATTGCGATTTTGGCGGCGTTTCACTTTTTTGGTCTTTACAAAACAATCTGGCGTTACGCCAGTGTCGGGGAACTGCTT TCCATAACCTATGCCGTCACGGTCGGGGTAGGCATCACTTTTGTGATCGTATTTTTTCAAGCCCCGCAGCGGATGCCTTA TACCGTGTCTTTGTTGTTTTGGCTGACGACGATTTTTTTAGTCGGAGGGGCCAGATTTACCCAGCGCCTGCGCCAGGAGA ACAGCAAACATTCCTCAGGCCCTGAGCAGCCGAAGCGGATTCTGATCATCGGAGCGGGAGACGCCGGTGTGCTGGCGCTC CGAGAGCTGAAGAACAGAGAATTTCAGGAGGGTTACCCGATCGGCTTCATTGACGACAGCCGGCGTAAAATCAGCCTTCA GCTTCAGGGTTTCCCTGTTTTAGGCTCCCGCGAAGAGATTCCTGAGGTGGTTCGCAAGTACAAGGTCGATGAAATTATTA TCGCCATCCCCTCCGCTTCAGGGGAAACAATCAGAGAACTGGTGGAAATCTGCAAGGGAACGAAAGCAACGCTCAAAATT TTGCCGGGAGTTTATGATATTATCGGCGGCAAACTGAATGTCAGCGCCATCCGTAATGTTCAGGTTGAAGACCTGCTTGG CAGGGACCCTGTTTCTGTTGATCTGGAAGAAGTAGCGGGCTATCTTAAGGGCCAGGTTATTCTGGTCACAGGAGCGGGCG GTTCCATCGGTTCAGAGCTTTGCCGGCAGATCCTGCGGTTCGGTCCGGAAAAATTGATCCTGGCCGGGCGCGGTGAGAAC TCAATTTTTGAAATCGAACAGGAATTGAAAAAATATCCTGTCAGTGCGGAGATTCTGGACATCAAGGATGCGGAAAAGGT CAGGAGAATATTTCAGAAGTACAAGCCTGCCGTCGTATTTCATGCCGCGGCTCATAAGCATGTGCCCCTGATGGAGAATA ATCCGGAAGAGGCTTTGAGAAACAATATTTACGGAACCCATAATCTAGCGCAAGCGGCGGCTGAGACCGGAGTAAAAACC TTCGTTTTGATTTCCACGGATAAAGCCGTTAATCCGACCAGTATCATGGGAGCTTCCAAAAGAATAGCTGAAATGGTCAT TCAGGATTATGACAAAAGATCAGAGACCAAGTTTGTCGCCGTGCGTTTCGGCAATGTACTGGGAAGCAGGGGAAGCGTCA TTCCCACTTTCAAGAAACAGATTCTCGCCGGGGGTCCGGTTACGGTCACCGACGAACGGATGACCCGTTACTTCATGACC ATTCCGGAAGCCGGTCAGCTGGTCATTCAGGCAGGGGCCATGGCTTCAGGAGGAGAGATCTTTATTTTGGATATGGGCAA GCCTGTGAAAATTATCGACCTGGCCAGGGACCTCATAAAATTGTCCGGGCTGGAAGTAGATAAAGATATCAAAATTGTGA CAACAGGAACAAGGCCGGGCGAAAAGCTTTTTGAAGAGCTGCTGACCGATGAGGAAGGGACGACGGCGACCAAAAACAAA AGGATTTTTGTGGCCAGGCCCAATAATATTTCCAGCGGCCAAATCAATGAGGTGGTCACAGAAATCAGCGAACGCGGAAA CCTTCTGCAAAAAGAGGAAACAGAAGCCCTGATCAGAAATTTAGTCCCGGATTTCCGTAAGAATGAGCTTGAAAAATAG Protein sequence : MSHPKRTVFLMFFDAILINLALFGSFYLRLAIEENSSVSTDYYSTYIDAAVFATIAILAAFHFFGLYKTIWRYASVGELL SITYAVTVGVGITFVIVFFQAPQRMPYTVSLLFWLTTIFLVGGARFTQRLRQENSKHSSGPEQPKRILIIGAGDAGVLAL RELKNREFQEGYPIGFIDDSRRKISLQLQGFPVLGSREEIPEVVRKYKVDEIIIAIPSASGETIRELVEICKGTKATLKI LPGVYDIIGGKLNVSAIRNVQVEDLLGRDPVSVDLEEVAGYLKGQVILVTGAGGSIGSELCRQILRFGPEKLILAGRGEN SIFEIEQELKKYPVSAEILDIKDAEKVRRIFQKYKPAVVFHAAAHKHVPLMENNPEEALRNNIYGTHNLAQAAAETGVKT FVLISTDKAVNPTSIMGASKRIAEMVIQDYDKRSETKFVAVRFGNVLGSRGSVIPTFKKQILAGGPVTVTDERMTRYFMT IPEAGQLVIQAGAMASGGEIFILDMGKPVKIIDLARDLIKLSGLEVDKDIKIVTTGTRPGEKLFEELLTDEEGTTATKNK RIFVARPNNISSGQINEVVTEISERGNLLQKEETEALIRNLVPDFRKNELEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-92 | 48 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 2e-98 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sgly_3011 | YP_004267281.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 4e-99 | 46 |
| Sgly_3011 | YP_004267281.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 6e-75 | 43 |
