Gene Information

Name : Sgly_0023 (Sgly_0023)
Accession : YP_004264401.1
Strain : Syntrophobotulus glycolicus DSM 8271
Genome accession: NC_015172
Putative virulence/resistance : Resistance
Product : ATPase P
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : 3.6.3.3
Position : 23386 - 25227 bp
Length : 1842 bp
Strand : -
Note : COGs: COG2217 Cation transport ATPase; InterPro IPR008250: IPR005834: IPR006404: IPR006416: IPR 001757; KEGG: cce:Ccel_0234 cadmium-translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; PRIAM: C

DNA sequence :
ATGAACAAGAAGCTTGTAAGAATTATCATAGCAGCGGTTATTTTCGTAATCGGGCTGCTAGTAAAAACCGACATTGTTTG
GCTTAGTCCCGCTATCTTCATTGCCGCCTACATTGTAGTGGGCAGCGAAGTCGTAATAAAAGCCATCAAGAATATTATGC
AAGGCCAAGTTTTTCAGGAAAGCTTTTTAATGACCGTGGCGACCGGTGGCGCACTTATCATTGGGGAATATCCAGAGGCC
ATTGCCGTTATGCTGTTTTATCAGGTTGGCGAATATTTTCAAAGTTATGCCGTTGCGAAGTCGCGGAAATCCATTGCAAG
CTTAATGGATATACGTCCTGATTACGCAAATGTTAAGAGGGGCGATGAATTGGTAAAAGTCGACCCTGACGAAGTTGCGA
TTGGCGATATCATCGTTGTCCGTGCTGGTGAAAAAATCCCGCTTGACGGCAAGGTGCTTGACGGCAATTCAATGATTGAT
ACGTCCGCTTTGACCGGCGAATCTGTTCCGCGCGAAGCTGGTGTTGGCTCTGATGTTTTGAGCGGCTGTATCAATGTGAA
CGGCGTACTGACGATTGAGGTCACAAAAGAATTTGGGGAATCGACGGTCAGCAAAATCCTTGATCTCGTGGAAAACGCCA
GTAGTAAAAAGGCGAACACCGAGAATTTCATTACAAAATTTGCACGAGTTTATACTCCGATTGTTATGGCTGCCGCACTG
TTGCTTGCAATTATCCCGCCTCTGTTCTTTGGTGGTACTTGGGGCGACTGGATTTACAGGGCTTTAACTTTCTTAGTGGT
TTCCTGCCCTTGCGCTCTGGTTGTTTCTATTCCACTCTCCTTCTTTGGCGGTATCGGCGGCGCGTCAAGGCGTGGTGTGC
TTGTTAAGGGTAGCAACTATTTAGAAGCTTTGGCGCAGACTGAAATCGTTGTGTTTGATAAGACGGGGACATTGACAAAA
GGCGTATTTAAAGTACAAGAGGTAAATGCTATCGGCATTTCCGAAGCAGAACTGCTGGAACTTACCGCACATGTTGAGAG
TTATTCCAATCACCCCATTTCACTCTCTTTGAAAACTGCTTATGGGAAAGATATTGACAACGAAAGGATTACGGATGTTG
AGGAAATCGCAGGCCACGGCGTCAGCGCAACGGTTGATAGTCGTAAAGTTTTCGCAGGAAATACAAAACTCATGCAAAAA
ATCGGCGTTAAATTTTCTCAAGACGAAATTATTGGAACAGCCGTACACGTTGCTGTTGATGGCAAATATGCGGGATATAT
TGTAATTGCTGATGAGGTTAAGGAAGATGCAGCGGAAGCGATTAGATTGCTAAAAAAGGCAAATATCCGTCAAACGGTGA
TGCTGACGGGCGACGCCAAGAGTGTGGGAGAAAAAGTTGCCAAGGAATTGGGGTTAGATAAGGTTTACACAGAGCTTCTT
CCCGGTGACAAGGTAGATAAAGTAGAGGAACTGCTGGCTCAAAAATCAGCTAAAGGCAAGCTGGCCTTTGTAGGCGATGG
GATTAATGACGCACCAGTTTTAGCTCGTGCCGACATTGGTATTGCGATGGGTGGCTTGGGTTCCGACGCGGCTATAGAAG
CCGCCGATGTTGTAATAATGACCGATGAGCCGTCCAAACTAGCTACAGGTATGAAAATTTCACAGAAAACGCTAAGAATC
GCACAACAGAATATATGGCTGGCTTTGTCGATAAAAGCAATTGTGCTTGTACTCAGTGCACTCGGTTTTGCTACCATGTG
GGAGGCTGTGTTTGCAGATGTTGGTGTGACGGTTATAGCGGTATTGAACTCTTTCCGTGCTTTAAACACAAAGAAATTAT
AA

Protein sequence :
MNKKLVRIIIAAVIFVIGLLVKTDIVWLSPAIFIAAYIVVGSEVVIKAIKNIMQGQVFQESFLMTVATGGALIIGEYPEA
IAVMLFYQVGEYFQSYAVAKSRKSIASLMDIRPDYANVKRGDELVKVDPDEVAIGDIIVVRAGEKIPLDGKVLDGNSMID
TSALTGESVPREAGVGSDVLSGCINVNGVLTIEVTKEFGESTVSKILDLVENASSKKANTENFITKFARVYTPIVMAAAL
LLAIIPPLFFGGTWGDWIYRALTFLVVSCPCALVVSIPLSFFGGIGGASRRGVLVKGSNYLEALAQTEIVVFDKTGTLTK
GVFKVQEVNAIGISEAELLELTAHVESYSNHPISLSLKTAYGKDIDNERITDVEEIAGHGVSATVDSRKVFAGNTKLMQK
IGVKFSQDEIIGTAVHVAVDGKYAGYIVIADEVKEDAAEAIRLLKKANIRQTVMLTGDAKSVGEKVAKELGLDKVYTELL
PGDKVDKVEELLAQKSAKGKLAFVGDGINDAPVLARADIGIAMGGLGSDAAIEAADVVIMTDEPSKLATGMKISQKTLRI
AQQNIWLALSIKAIVLVLSALGFATMWEAVFADVGVTVIAVLNSFRALNTKKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 8e-96 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sgly_0023 YP_004264401.1 ATPase P BAC0455 Protein 6e-160 57
Sgly_0023 YP_004264401.1 ATPase P BAC0055 Protein 9e-117 45