Gene Information

Name : Sgly_1994 (Sgly_1994)
Accession : YP_004266289.1
Strain : Syntrophobotulus glycolicus DSM 8271
Genome accession: NC_015172
Putative virulence/resistance : Resistance
Product : phosphonate-transporting ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.28
Position : 2008307 - 2008987 bp
Length : 681 bp
Strand : +
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: aoe:Clos_1200 ABC transporter related; PFAM: ABC transporter-like; PRIAM: phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core;

DNA sequence : 
ATGCCCGAAATACTTAATATGCAAAAGATCTGTAAAAGCTACTATATGGGCGAAGAAGAACTGGAAGTCCTGCATGATAT
CAATCTAACCATTTGTCATGGCGAATTTTTGTCCGTTCTCGGTCCTTCAGGTTCAGGAAAATCGACATTAATGAATATTA
TCGGCTGTCTTGATATCCCAACCAAGGGAATATACGTTCTTGCCGGGAATAACATTGATGATCTTGATGAAATTGAACTT
GCCCGGGTTCGCAATAAAGAAATAGGTTTTGTCTTTCAAAGCTTTCAGTTGCTGCCCCGTCTGACAGCATTGGAAAATGT
GGAGCTTCCCTTAATTTACAAAGGACTGCCCGCTTCAGAACGCAAGAGATTGGTCAAGCAAATTTTGGAACGGGTCGGAC
TTGCCGAAAAGACACATCATTTGCCTAATCAGTTATCCGGCGGTCAGCAGCAACGGGTAGCGATTGCCCGGGCTTTGGTC
ACTGGGCCTTCAATTGTCCTTGCCGACGAACCAACCGGGGCTTTGGATCAAAAAACCGGTGAACAGGTCATGGCGCTTTT
TGAAGAGTTAAACCACGATGGGCGTACAATTATTATGATTACCCATGACAGCAATATTGCCCGTCATGCCACAAGAGTGG
TTCATATTTTGGACGGATACCTGACTGAGTGGGAGGAATGA

Protein sequence : 
MPEILNMQKICKSYYMGEEELEVLHDINLTICHGEFLSVLGPSGSGKSTLMNIIGCLDIPTKGIYVLAGNNIDDLDEIEL
ARVRNKEIGFVFQSFQLLPRLTALENVELPLIYKGLPASERKRLVKQILERVGLAEKTHHLPNQLSGGQQQRVAIARALV
TGPSIVLADEPTGALDQKTGEQVMALFEELNHDGRTIIMITHDSNIARHATRVVHILDGYLTEWEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sgly_1994 YP_004266289.1 phosphonate-transporting ATPase NC_012469.1.7686878. Protein 4e-64 58
Sgly_1994 YP_004266289.1 phosphonate-transporting ATPase NC_008702.1.4606598. Protein 3e-44 48
Sgly_1994 YP_004266289.1 phosphonate-transporting ATPase CP001581.1.gene598.p Protein 2e-40 47
Sgly_1994 YP_004266289.1 phosphonate-transporting ATPase CP001581.1.gene798.p Protein 1e-42 44
Sgly_1994 YP_004266289.1 phosphonate-transporting ATPase NC_012469.1.7685735. Protein 1e-32 41