|
Name : Sgly_1771 (Sgly_1771) Accession : YP_004266069.1 Strain : Syntrophobotulus glycolicus DSM 8271 Genome accession: NC_015172 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1794528 - 1797089 bp Length : 2562 bp Strand : - Note : COGs: COG0249 Mismatch repair ATPase (MutS family); HAMAP: DNA mismatch repair protein MutS, type 1; InterPro IPR005748: IPR007695: IPR007860: IPR007696: IPR 007861: IPR000432; KEGG: dhd:Dhaf_2735 DNA mismatch repair protein MutS; PFAM: DNA mismatch repai DNA sequence : ATGGCAACAACTCCTATGCTTAAACAATACGAAAGCATTAAGGCCAAGGTTCCGGACTGCATTTTATTTTTCAGGCTTGG GGATTTTTATGAAATGTTTGCAGATGATGCCTTAACAGCCGCGCCTGTTCTGGAAATAGCCCTAACCTCCCGTGAGGGAG GAAGTGGCAGCAGGATTCCCATGTGCGGCGTTCCTCACCATTCAGCGGAAAATTATATTCAGAAGCTGATTGCCGCCGGT TTTAAAGTGGCTATTTGCGAACAGACAGAAGATCCGCAACAGAGCAAGGGCATTGTAAAGCGCGATATCGTGCGCATCGT TTCACCAGGAACTGTGGATACCGTTGCCGCAGAGCATAAGAATAATTACCTGGCGGCTATTTACAAAGAAAAAGATTGGG GACTGGCCTATTTAGATCTGACGACAGGGGATTTTCGCTTGTTTCAGACACCCAGTCAACAAACCTTATTAAATGAGCTG AATCGGATCAATCCCGCTGAGATTATCTTGCCCAAAGAATTTGCTGTCTCCATGAGCAAGGCTTTAGACGGCTATTATAG CAATGCTGCAGATAAGACAATTTTTTCATCCCTGGCCGGTTTCCGGGAACGGTTTCACAATTATACCGGCTTGCTGGAAC AGATGCCGGTATCAGCCAGAGCAGCCGGTGCTTTATGGAACTATATTAAAAAGAATATTCCTGATTCCAGCCTGCAAAAT GTGATCGAATTAAAAAGCTGCCGGCAATCGGAAGTCATGGTACTTGACCGCTGGACCAGAAAGAACCTTGAATTGGTTGA AAGCTCCCGTTTTGGTGATGAAAGGGGTACGATTTTTGACGTACTGAATCTTACCAAAACTGCTTTTGGGGCAAGAATGC TCAGGCATTGGATCCAGCAGCCCCTCTTGAATAAGGAGCAAATTGAGGCTCGCCTGGATACGGTTGAAGAGCTGACCAAA AATACGTTTGCCCGGCAGGAGCTGTTCAAATGCTTAAGTCATGTCTATGACCTGGAAAGACTGACAGCCAGGCTTTCCTA TGGGAAAGCCAGCCCCAGAGATATGCTGGCTTTGGCCGCTACCCTGGCTTGTCTTCCGGAAGTACGAAAGATTATTCATC AACATCAAGTCCTGACATTAACAAAATATCTCGAACCAATCTCCGGCCTGGATGATCTTTCCGCCAAACTCCTAAAAGCC ATTAATCCTGATGCTCCGGTGACATTGCATGAGGGCAATATCATCAACAACGGTTACATTCCGGAAATCGACCGTCTCCG GGCCGTTGCCTCAGGCGGCAGAGATTGGATCGCCCGCCTGGAAAATCAGGAAAGAGAAAAAACGAAGATTAAGTCTTTAA AAATAGGTTATAATAAAGTTTTTGGCTATTACATCGAAATCACCAATGCCAATTCCCATTTGGTCCCGGAAGATTATATC CGAAAACAGACCCTGGCCAATTGCGAACGCTATATTACACCGGAGCTTAAAGAATACGAGCAACAGGTTCTCAACGCTCA GGAGAAGCTTTTTGATCTGGAATACGCCGTATATACGGAACTGAAAGACGAGGTTTTATCCCACACTCCGCCAATTCTTA ATGCCGCTCAGGCCATCGGCGAGATAGATGTTTTTTTATCTTTGGCTGAAGCTGCTGTCCGCCATCATTATGTCCGTCCG GAAATCAACAACGAAGGGACGATTCATATTGTTGAAGGCAGACATCCTGTTGTTGAACAGGTTTGCAACGATTTATTTGT TCCCAATGACACTCTGTTAACCTCCTCAAAAAGCCTGGCCTTAATTACAGGCCCCAATATGGGAGGCAAATCAACCTATA TGAGACAGGTAGCGCTCATTGTTCTGCTGAGCCAGGTCGGGTCTTTTGTTCCCGCTCAGAAAGCCGCAATCGCTTTGCGG GATTGTATCTATACCAGAGTCGGTGCCTCCGATAACCTGGCCTCCGGTCAGAGTACCTTCATGGTTGAAATGAATGAGGT TGCCTTTATTCTGCAAAATGCAGCATCCCGCAGCCTGATCATCCTGGATGAAGTGGGGCGCGGAACGGCAACCTATGATG GCTTAAGTCTGGCCTGGGCGATTGTTGAATATCTCGCAGGCAACCCGACAGCCCAGCCCCTGACGCTATTCGCCACGCAT TACCACGAATTGACCGCTCTTGAAACCATGTTTCCCGCAGTATTCAACCTGCACGTCGCTGTCCGGGAAAAGGGATCGGA CATTCTATTTCTGCATAAAATCCTGCCCGGCAAAGCAGACCGGAGCTATGGCCTGCATGTCGCCAAAATTGCCGGATTGC CCTTGGATCTCCTGAAAAGGGCCGAGAGCATTTTACGCGAGCTGGAAAGTCTTTCCGGTGAAACATATCCCGATAAAGCC ACAAGAGTGGAGGTTCTCCAGCCCAGCTTATTTGATCAGGAGGAGGTCCACCCGCTCCTTAAAGAGGTTGAAGAAATTGA CCTTGATCGGATGACCCCCAAACAGGCTATGGATTATCTCTATGATTTGGTCAGCAGAATCCGGTCGTCGAAAGTTTTGT AG Protein sequence : MATTPMLKQYESIKAKVPDCILFFRLGDFYEMFADDALTAAPVLEIALTSREGGSGSRIPMCGVPHHSAENYIQKLIAAG FKVAICEQTEDPQQSKGIVKRDIVRIVSPGTVDTVAAEHKNNYLAAIYKEKDWGLAYLDLTTGDFRLFQTPSQQTLLNEL NRINPAEIILPKEFAVSMSKALDGYYSNAADKTIFSSLAGFRERFHNYTGLLEQMPVSARAAGALWNYIKKNIPDSSLQN VIELKSCRQSEVMVLDRWTRKNLELVESSRFGDERGTIFDVLNLTKTAFGARMLRHWIQQPLLNKEQIEARLDTVEELTK NTFARQELFKCLSHVYDLERLTARLSYGKASPRDMLALAATLACLPEVRKIIHQHQVLTLTKYLEPISGLDDLSAKLLKA INPDAPVTLHEGNIINNGYIPEIDRLRAVASGGRDWIARLENQEREKTKIKSLKIGYNKVFGYYIEITNANSHLVPEDYI RKQTLANCERYITPELKEYEQQVLNAQEKLFDLEYAVYTELKDEVLSHTPPILNAAQAIGEIDVFLSLAEAAVRHHYVRP EINNEGTIHIVEGRHPVVEQVCNDLFVPNDTLLTSSKSLALITGPNMGGKSTYMRQVALIVLLSQVGSFVPAQKAAIALR DCIYTRVGASDNLASGQSTFMVEMNEVAFILQNAASRSLIILDEVGRGTATYDGLSLAWAIVEYLAGNPTAQPLTLFATH YHELTALETMFPAVFNLHVAVREKGSDILFLHKILPGKADRSYGLHVAKIAGLPLDLLKRAESILRELESLSGETYPDKA TRVEVLQPSLFDQEEVHPLLKEVEEIDLDRMTPKQAMDYLYDLVSRIRSSKVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 2e-140 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sgly_1771 | YP_004266069.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 2e-151 | 44 |
