Gene Information

Name : Sgly_1498 (Sgly_1498)
Accession : YP_004265800.1
Strain : Syntrophobotulus glycolicus DSM 8271
Genome accession: NC_015172
Putative virulence/resistance : Virulence
Product : phosphonate-transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : 3.6.3.28
Position : 1513630 - 1514394 bp
Length : 765 bp
Strand : +
Note : COGs: COG1121 ABC-type Mn/Zn transporters ATPase component; InterPro IPR003439: IPR003593; KEGG: dhd:Dhaf_0031 ABC transporter related; PFAM: ABC transporter-like; PRIAM: phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: uncharacteriz

DNA sequence : 
GTGGAAAGAGAAAGAGAAGATTATGCGGTGGAATTGCAAGACCTCACGGTTGCCTACGACGCCAAACCGGTTTTATGGGA
CATTGATCTGAAAATTCCCCAGGGAAAGCTGATGGCGGTGGTCGGGCCCAACGGCGCAGGCAAGACCACCTTGATCAAAG
CAATGCTGGGGCTGCTCAGACCAGTTTCCGGAGCTGTTCGCTTTTTGAATGGAAATGACAACGGCGGCGATCTGCGCTCC
CTGAAAAACCGCATTGGCTACGTTCCTCAAAGCGGCAGCGTAGACTGGGATTTCCCGGCAACCGTGCAGGACGTCGTACT
GATGGGCTGCTATGGAAAGCTCGGCTGGATCAGGCGGCCCCGTAAGGCGGATTTGGCGCTGGCGCGGCAAACCCTGCAAA
AGGTCGGCATGGCGGAATACGCCTCCCGTCAGATCAGCCAGCTTTCCGGCGGGCAGCAGCAGCGGGTGTTTTTGGCCCGG
GCCCTGGTGCAGGAGGCGGAGGTCTATTTCATGGACGAACCGTTTAAAGGGGTGGATGCCCAGACGGAAAAAGCCATCGT
GCTGCTCTTAAAGGAACTGAAAGAGCAGGGCAAAACCGTCGTAGTGGTCCACCACGACCTGCAGACCGTCGCCAACTATT
TTGATTGGGTGACACTGATCAACTTGCGGGTGGTCGCCAGCGGACCGGTCGAAGAGGTTTTTCATGAGGAAAACGTGCAA
AAAACTTACCGGAGCACCGGTAAGCTGTTAAGGAGCACAGTGTGA

Protein sequence : 
MEREREDYAVELQDLTVAYDAKPVLWDIDLKIPQGKLMAVVGPNGAGKTTLIKAMLGLLRPVSGAVRFLNGNDNGGDLRS
LKNRIGYVPQSGSVDWDFPATVQDVVLMGCYGKLGWIRRPRKADLALARQTLQKVGMAEYASRQISQLSGGQQQRVFLAR
ALVQEAEVYFMDEPFKGVDAQTEKAIVLLLKELKEQGKTVVVVHHDLQTVANYFDWVTLINLRVVASGPVEEVFHEENVQ
KTYRSTGKLLRSTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 2e-45 46
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 2e-45 46
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-49 44
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-49 44
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-49 44
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-48 44
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-48 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sgly_1498 YP_004265800.1 phosphonate-transporting ATPase BAC0400 Protein 6e-70 62
Sgly_1498 YP_004265800.1 phosphonate-transporting ATPase BAC0350 Protein 8e-50 44
Sgly_1498 YP_004265800.1 phosphonate-transporting ATPase BAC0440 Protein 2e-47 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sgly_1498 YP_004265800.1 phosphonate-transporting ATPase VFG0526 Protein 8e-50 44