Gene Information

Name : Sgly_1229 (Sgly_1229)
Accession : YP_004265546.1
Strain : Syntrophobotulus glycolicus DSM 8271
Genome accession: NC_015172
Putative virulence/resistance : Resistance
Product : phosphonate-transporting ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.28
Position : 1232535 - 1233218 bp
Length : 684 bp
Strand : -
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: ckr:CKR_3132 hypothetical protein; PFAM: ABC transporter-like; PRIAM: phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPT

DNA sequence : 
ATGAATTTATTAGAGGTAAGGGCCGTTTGCAAGACTTACGGTACCGGAGAGACGGCGGTTGCCGCCTTAGAAAATGTGAG
CTTTTCGATTCCCAAAGGCCAATTTATCGCAGTTGTCGGGGAATCCGGCTCTGGAAAAAGTACGCTGCTTAATATGATTG
GGGCACTCGATACCCCTACCTCCGGCAAGGTGCTTATTGATGGCAACGATATCTTCAGGATGACGGACGAGAAGCTGACC
ATCTTCCGCCGCAGGAACATTGGATTCGTCTTTCAGGCCTTCAACCTGATCCCGGAACTCAATGTCGAGCAGAATATTAC
GTTCCCTGTTTTACTCGACTACAAGAAGCCGAATCAGTCCGATGTCGAAGAAATCCTTACCGTGCTTTCTCTCCAAGACA
GACGGCATCATCTGCCGCGCCAGTTATCCGGCGGGCAGCAGCAGCGCGCAGCGATTGGCCGCGCCCTGATTACCCGCCCC
ATGCTGATTCTTGCAGACGAGCCGACCGGAAATTTGGATAGTCAAAACAGCAGCGAGGTGATCGCACTTCTGAAAACGGC
ATCCAAACGCTATCAACAGACAATCATCATGATTACGCATAACCGAAGCCTTGCTTCTGCGGCTGACCGTGTGCTGCAGG
TATCGGACGGTGTTCTTACCGACTTAGGAGGATATGCCGGATGA

Protein sequence : 
MNLLEVRAVCKTYGTGETAVAALENVSFSIPKGQFIAVVGESGSGKSTLLNMIGALDTPTSGKVLIDGNDIFRMTDEKLT
IFRRRNIGFVFQAFNLIPELNVEQNITFPVLLDYKKPNQSDVEEILTVLSLQDRRHHLPRQLSGGQQQRAAIGRALITRP
MLILADEPTGNLDSQNSSEVIALLKTASKRYQQTIIMITHNRSLASAADRVLQVSDGVLTDLGGYAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 2e-38 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-35 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sgly_1229 YP_004265546.1 phosphonate-transporting ATPase CP001581.1.gene798.p Protein 9e-85 77
Sgly_1229 YP_004265546.1 phosphonate-transporting ATPase CP001581.1.gene598.p Protein 1e-54 53
Sgly_1229 YP_004265546.1 phosphonate-transporting ATPase NC_012469.1.7686878. Protein 2e-39 42
Sgly_1229 YP_004265546.1 phosphonate-transporting ATPase NC_008702.1.4606598. Protein 4e-34 41