Gene Information

Name : Sgly_1123 (Sgly_1123)
Accession : YP_004265449.1
Strain : Syntrophobotulus glycolicus DSM 8271
Genome accession: NC_015172
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 1119725 - 1119928 bp
Length : 204 bp
Strand : +
Note : COGs: COG1476 transcriptional regulator protein; InterPro IPR001387; KEGG: clj:CLJU_c19380 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Conserved protein with HTH domain; PFAM: Helix-turn-helix

DNA sequence :
ATGATCATAAAAACAAGAATCAAAGAGTACCGTGCAAAGCACAATATGAAACAAGAGGATTTAGCAAGGCTTGTAGGTGT
TAGAAGGGAAACGATATATCATCTTGAAAACGGAAAATACAACCCCTCTCTCGCTCTGGCCTATTTGATTGCAAAAGTAT
TTAAAGTATCAATAGAGGAAATTTTTGAGATCACTGAGGAATAG

Protein sequence :
MIIKTRIKEYRAKHNMKQEDLARLVGVRRETIYHLENGKYNPSLALAYLIAKVFKVSIEEIFEITEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 4e-05 45
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 3e-05 45
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 5e-10 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sgly_1123 YP_004265449.1 XRE family transcriptional regulator VFG2175 Protein 1e-05 45
Sgly_1123 YP_004265449.1 XRE family transcriptional regulator VFG2168 Protein 1e-05 45