Gene Information

Name : Sgly_1040 (Sgly_1040)
Accession : YP_004265372.1
Strain : Syntrophobotulus glycolicus DSM 8271
Genome accession: NC_015172
Putative virulence/resistance : Resistance
Product : phosphonate-transporting ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.28
Position : 1027564 - 1028172 bp
Length : 609 bp
Strand : -
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: dsy:DSY2016 hypothetical protein; PFAM: ABC transporter-like; PRIAM: phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR

DNA sequence : 
ATGATTGAAGGAATTGATATCACCAAAAAGTTTGATGGTCTGACTCTCTTTCAGGATTATAATTTTCTGATCGAGGATCA
GGAATTCGTCTGCTTTTCCGGTGCCAGCGGAACGGGAAAGACCACCTTATTAAACATGATCGGCTTAATCGAGCCGATTG
ACGCCGGAAGCTTAAGAATCAATGGAATCGAGTACACGACCAATAAGCAGAAACTGGAGTATTTCCGCTCTGTCGCCGGG
TTTATCTTTCAAAATTTCGCGCTGATCGAAAGTAAAACAGTTGAACAGAACCTTGAGTTGATCAGGCAGGGCAGCCGCAC
CAATCATACGATTGAAGAAGTGCTGGAAAGAGTCGGGTTAGAAAGCAAACTGCATAGCAAAGTCTATACCCTGTCCGGCG
GAGAGCAGCAGCGGGTAGCATTGGCCCGTTTATTTCTAAAAAAATGCCAGATCGTTTTAGCGGATGAACCGACAGGATCG
CTGGACGCCAAAAATGCTCAAATCATTATGGATATTCTGCTTTCACTAAATGCCGAAGGGAAAACCGTCATTATCGTGAC
CCATGATCAAAAAATTAAAGATAAGGCCCAGAGAGTGATCGAACTATAA

Protein sequence : 
MIEGIDITKKFDGLTLFQDYNFLIEDQEFVCFSGASGTGKTTLLNMIGLIEPIDAGSLRINGIEYTTNKQKLEYFRSVAG
FIFQNFALIESKTVEQNLELIRQGSRTNHTIEEVLERVGLESKLHSKVYTLSGGEQQRVALARLFLKKCQIVLADEPTGS
LDAKNAQIIMDILLSLNAEGKTVIIVTHDQKIKDKAQRVIEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-31 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sgly_1040 YP_004265372.1 phosphonate-transporting ATPase NC_012469.1.7686946. Protein 1e-32 46