Gene Information

Name : join (Sgly_0096)
Accession : YP_004264470.1
Strain : Syntrophobotulus glycolicus DSM 8271
Genome accession: NC_015172
Putative virulence/resistance : Unknown
Product : transposase protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 96827 - 97979 bp
Length : 1153 bp
Strand : -
Note : InterPro IPR002514; KEGG: cth:Cthe_2772 transposase IS3/IS911; PFAM: transposase IS3/IS911; SPTR: transposase IS3/IS911; manually curated; PFAM: Integrase core domain; transposase

DNA sequence :
ATGAATAAGCGAAACCATTATCCAGCCGAGTTTAAAACCAAGGTAGTCCTGGAGGTAATACAGGAAGCCTCCACCGTCAA
TGAAATTGCCGCAAAGTACGGTATCAGTCCTGTTGTTATCAGCCGCTGGAAGCAAGAGTTTCTGGAACGAGCCGCGGAGG
TATTTAAGAAAGGGCCTTCGGATGCCGAGAAAGAACTTGATAAACAGCAGCGTCACGTAGCAGAACTTGAACGCAAGGTT
GGTCAGCTCACCTACGAGGTGGACTGGCTCAAAAAAAAATCTGAGCAAATTGTCGGAGCCGACTGGCAGAAAAAGTTTCG
TTGACCGGGACAATCCCCGAATTAGCGTTAAGCGCCAGGCGCAATTGCTGAGCATTAACCGCAGCAGTGTTTACCGCCGT
ATTTCTGAGCAGAAGACCCTTTCCGATGCGGAATTATTTGTGATGCGCCGGATCGATGAGATCCACACGGGTGAGCCAAC
CTGGGGCTACCGAACCATTACAACAATCCTGAGAAGAGACTATGGCTTGCTTATCAACAGAAAACGAGTTCGCCGCATCC
TGCGGGATATGGGGATTTACACAATTTATCCGAAACCCAATCTAAGCAAACGGTACCATTCCCAATACATCCGGCCGTAC
TTGTTGCGCAAGCTGGAAATCAACCGGCCGGATCAGGTGTGGGGGATAGACATTACATATATTCGAATGAAAAAAGGATT
CATGTACCTATTCGTCATTATCGATTGGTACAGCCGCTATATTGTTGACTACGAACTGTCCAGTACGCTTGATAAATCTT
TTGTCCTGAGTTGCTTAAAACGTGCCATGAGTCATAGAAAGCCCGAAATTATCAACAGTGACCAGGGGGGCCATTTCACG
AATCCAGATTATATTTTGCTGCTCGAAAGCGCCGGCGTGAAAATTTCCATGGATGGCCGAGGGCAATGCCTTGATAATGC
CCGAACCGAGAGATTCTTCAGAACGTTGAAATATGACAGAATATACGTCAATGAATACGCGACGCCGCGGGAACTCAGAC
AGATGCTCAACGAATACATGAAAACCTACAATACCTATCGTCCCCATTCTTCATTAGCTGGGGTCTGTCCCTTAGATGTC
TACTCAAAAAGTAAGCGCATTGTGGCTGCTTAA

Protein sequence :
MNKRNHYPAEFKTKVVLEVIQEASTVNEIAAKYGISPVVISRWKQEFLERAAEVFKKGPSDAEKELDKQQRHVAELERKV
GQLTYEVDWLKKKNLSKLSEPTGRKSFVDRDNPRISVKRQAQLLSINRSSVYRRISEQKTLSDAELFVMRRIDEIHTGEP
TWGYRTITTILRRDYGLLINRKRVRRILRDMGIYTIYPKPNLSKRYHSQYIRPYLLRKLEINRPDQVWGIDITYIRMKKG
FMYLFVIIDWYSRYIVDYELSSTLDKSFVLSCLKRAMSHRKPEIINSDQGGHFTNPDYILLLESAGVKISMDGRGQCLDN
ARTERFFRTLKYDRIYVNEYATPRELRQMLNEYMKTYNTYRPHSSLAGVCPLDVYSKSKRIVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ACF06170.1 putative transposase Not tested Tn5036-like Protein 2e-44 43