Gene Information

Name : Celly_2413 (Celly_2413)
Accession : YP_004263101.1
Strain : Cellulophaga lytica DSM 7489
Genome accession: NC_015167
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2720675 - 2723227 bp
Length : 2553 bp
Strand : -
Note : COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR004176: IPR003959: IPR001943: IPR013093: IPR 019489: IPR003593; KEGG: fbc:FB2170_15098 ATP-dependent Clp protease, ATP-binding subunit ClpC; PFAM: ATPase, AAA-2; Clp, N-terminal;

DNA sequence :
ATGGATGACAATTTTTCACCTAGAGTAAAAGATGTAATTGCGTACAGCAAGGAGGAGGCATTAAGACTTGGACACGATTT
TATTGGTACCGAGCACTTAATGCTTGGCTTATTACGAGACGGAAACGGAAAAGCAATTAATATATTAGATGCATTAGAGG
TAGATTTAGATCATTTGCGACGCAAGGTGGAAATACTTAGCCCAGCAAATCCTAGCTCTGACAATTTGCAAAAAGATAAA
AAAAACTTGCACTTAACAAGGCAAGCAGAACGCGCATTAAAAACAACATTTTTAGAAGCTAAACTTTTTCAAAGCTCTTC
TATTAATACAGCGCATTTATTACTATGTATTTTGAGAAACGAAAACGACCCTACTACTAAGCTTTTACACAAACTAAAAG
TAGATTACGATAATGTAAAAAGTGAATTTAAAACCATTATTACTAAAGATGAAGACTATATAGATTCTCCAAGAGCAGAG
TCTTTCCCTGGTGATGCAGATAGTGATAATGATGAAAAAGAAAACTTTGGTGGAGGTGCTACAGCTGGACCAAAATCTAA
CAAAAAATCTAAAACACCAGTTTTAGACAATTTTGGTAGAGACTTAACCAAAATGGCAGAGGAAAACAAATTAGACCCTG
TTGTTGGTAGAGAAAAAGAAATAGAGCGTGTATCTCAAATATTATCTCGTCGTAAAAAAAATAACCCACTTTTAATTGGT
GAACCTGGTGTGGGTAAAAGCGCCATTGCAGAAGGTTTAGCATTACGTATCATTAACAAAAAGGTTTCTAGAATTTTATA
CAACAAACGCGTTGTTACACTAGATTTAGCCTCTTTAGTTGCTGGCACAAAATATCGTGGACAGTTTGAAGAACGTATGA
AAGCTGTTATGAATGAGCTAGAAAAGAATGATGATATTATTCTTTTTATTGACGAAATACATACTATTGTTGGTGCTGGT
GGTGCTACAGGAAGCTTAGATGCTTCTAATATGTTTAAACCTGCATTAGCCCGTGGAGAAATACAATGTATTGGCGCCAC
AACATTAGATGAATACAGACAGTATATAGAAAAAGATGGTGCTTTAGAACGTCGTTTTCAAAAAGTAATTGTAGAGCCTA
CTTCTGTAGACGAAACAATAGAAATTTTGCAAAACATTAAGGGCAAGTATGAGGAACACCACAATGTAAATTATACAGAT
GAAGCTTTAGTTGCTTGTGTAAAATTAACGAACCGTTATATGACAGATCGTTTTTTACCAGACAAGGCTATTGACGCGCT
AGATGAAGCTGGCTCTAGAGTACACATAGTTAATATGGATGTACCTAAACAAATTTTAGAGTTAGAAAAACAACTAGAAG
ATGTTAGAGAACTAAAAAATACCGTTGTTAAAAAACAACGTTATGAAGAGGCTGCTAAGCTTAGAGATGATGAAAAAAGA
ATTGAAAAAGATTTAGCTCTTGCTCAAGAAAAATGGGAAGAAGAAAGCAAATTACATAGAGAAACAGTTACAGAAGAAAA
TGTAGCAGATGTAGTTTCAATGATGAGTGGTATTCCTGTAAACAGAATTGCGCAAACTGAAATTAATAAATTAGCAGAAT
TACCAAGCTTAATTAAAGGCAACGTAATTGGTCAAGATGATGCTGTTGCAAAGGTATCTAAAGCCATACAACGTAACAGA
GCCGGACTTAAAGATCCTAACAAGCCAATTGGGTCGTTTATATTTTTAGGCCAAACCGGTGTTGGTAAAACACAATTAGC
AAAAGTACTTGCTAAAGAATTATTTGACTCTGAAGATGCACTTATACGTATTGATATGAGTGAGTATATGGAGAAATTTG
CAATCTCTAGATTAGTTGGTGCGCCTCCAGGATACGTTGGTTATGAAGAAGGCGGACAATTAACTGAAAAAGTACGCAGA
AAACCTTATTCTGTTGTTTTATTAGACGAGGTAGAAAAAGCACATCCAGATGTGTTTAATATGATGCTTCAGGTATTAGA
TGATGGCTTTTTAACAGATAGTTTAGGTCGTAAAATAGACTTTAGAAACACTATTATTATAATGACATCTAATATTGGTG
CACGTCAATTAAAAGATTTTGGACAAGGTGTTGGTTTTGGAACTTCTGCAAAAAAAGCACAAGCAGATGAACACCAGAAA
AGTGTTATTGAAAATGCACTTAAAAAAGCATTTGCTCCTGAGTTTTTAAACAGAATTGATGACGTAATAGTATTTAACCC
ATTAGAAAGAGCAGATATCCATAAAATTATTGACATTGAGTTAAGCAAACTTTATGCAAGAATTAAAGATATAGGTTACA
ACTTAACATTATCAGAAAAAGCTAAAGACTATATTGCAGACAAAGGATTTGATAAGCAATATGGAGCAAGACCTTTAAAA
AGAGCAATTCAAAAGTATATTGAAGATGCTTTAGCTGAAGAAATAGTAAACTCTAAGCTAGAAGAAGGTGACAGTATTTT
TATGGATTTAAATGATGAAAAAAACGAACTTACCATAAAAATTAAGAAAGAAGGAAAAGCATCTGAAGCTTAA

Protein sequence :
MDDNFSPRVKDVIAYSKEEALRLGHDFIGTEHLMLGLLRDGNGKAINILDALEVDLDHLRRKVEILSPANPSSDNLQKDK
KNLHLTRQAERALKTTFLEAKLFQSSSINTAHLLLCILRNENDPTTKLLHKLKVDYDNVKSEFKTIITKDEDYIDSPRAE
SFPGDADSDNDEKENFGGGATAGPKSNKKSKTPVLDNFGRDLTKMAEENKLDPVVGREKEIERVSQILSRRKKNNPLLIG
EPGVGKSAIAEGLALRIINKKVSRILYNKRVVTLDLASLVAGTKYRGQFEERMKAVMNELEKNDDIILFIDEIHTIVGAG
GATGSLDASNMFKPALARGEIQCIGATTLDEYRQYIEKDGALERRFQKVIVEPTSVDETIEILQNIKGKYEEHHNVNYTD
EALVACVKLTNRYMTDRFLPDKAIDALDEAGSRVHIVNMDVPKQILELEKQLEDVRELKNTVVKKQRYEEAAKLRDDEKR
IEKDLALAQEKWEEESKLHRETVTEENVADVVSMMSGIPVNRIAQTEINKLAELPSLIKGNVIGQDDAVAKVSKAIQRNR
AGLKDPNKPIGSFIFLGQTGVGKTQLAKVLAKELFDSEDALIRIDMSEYMEKFAISRLVGAPPGYVGYEEGGQLTEKVRR
KPYSVVLLDEVEKAHPDVFNMMLQVLDDGFLTDSLGRKIDFRNTIIIMTSNIGARQLKDFGQGVGFGTSAKKAQADEHQK
SVIENALKKAFAPEFLNRIDDVIVFNPLERADIHKIIDIELSKLYARIKDIGYNLTLSEKAKDYIADKGFDKQYGARPLK
RAIQKYIEDALAEEIVNSKLEEGDSIFMDLNDEKNELTIKIKKEGKASEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Celly_2413 YP_004263101.1 ATPase VFG0079 Protein 0.0 49
Celly_2413 YP_004263101.1 ATPase VFG0080 Protein 9e-152 49