|
Name : Celly_1767 (Celly_1767) Accession : YP_004262462.1 Strain : Cellulophaga lytica DSM 7489 Genome accession: NC_015167 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1970386 - 1971657 bp Length : 1272 bp Strand : - Note : COGs: COG0172 Seryl-tRNA synthetase; InterPro IPR002317: IPR015866: IPR002314; KEGG: fbc:FB2170_04200 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Seryl-tRNA synthetase, class IIa, N-terminal; PRIAM: Ser DNA sequence : ATGCTACAGCTTCAAGCTATCCGAGAACAAAAAGACGAGATTATTATCGCCCTAAAAAAGCGTAATATAGATGCAGCTCC TTTGTTAGAAAACGTACTTTCATTAGATGAAAAACGTAGAGATGCACAAACCAAATTAGATAACACACTTGCAGAGAGTA ATAAGTTATCTAAAGAAATTGGTATGCTTTTTAAGTCCGGAAAAGCATCTGAAGCAACAGTTTTAAAAGAGCGCACCGTT GTTTTAAAAGAAGAGTCTAAAACATACCAAGAAGAATTAAATACGGTTGCTGAGGAATTACAAAGTTTACTGTACCAAAT TCCTAATGTACCACACCCTAGTGTACCTGCAGGAAACACAGATGAAGATAATGAGGAAATTTTTAGAGAAGGAGATATTC CTGAATTAATAGAAGGTGCTTTACCACACTGGGAACTAGCTAAAAAATATGACATTATAGATTTTGAACTTGGTGTTAAA ATTGCTGGTGCTGGTTTTCCTGTTTATAAAGGAAAAGGTGCTAGATTACAACGTGCACTTATTGCTTACTTTTTAGACAA AAATACAGCCGCTGGTTACCAAGAAATTCAAGTTCCGCATTTGGTAAATGAAACTTCTGGTTACGGAACAGGTCAGTTAC CGGACAAAGAAGGACAAATGTACCACGTTACTGCAGATGATTTATACTTAATACCAACTGCAGAAGTACCTGTAACTAAC ATTTTTAGAAACACTATTGTTAACCAAAAAGATTTTCCTATTACATACACAGGTTATACACCTTGTTTTAGGAGAGAAGC TGGTAGCTATGGTGCGCACGTGCGTGGCTTAAATAGATTGCACCAGTTTGATAAAGTAGAACTTGTACGCGTAGAGCACC CAGACAATTCGTATGCTGCTTTAGATGGTATGGTAGAACATATAAAAGATATTTTAAGAGAATTAAAATTACCATACAGA TTGTTACGCCTTTGTGGCGGAGACCTTGGTTTTACATCTGCTCTTACGTTTGATTTTGAAGTGTTTTCTACAGCACAAGA CCGTTGGTTAGAGATTAGCTCTGCGTCTAACTTTGAAGCATACCAAGCTAACAGACTTAAACTACGTTTTAAAGATGAAA ACGGCAAAAGCCAATTTGCACATACTTTAAACGGAAGTTCTTTAGCTTTACCACGTGTTTTAGCCGGGATTTTAGAAAAT TACCAAACAGAAAAAGGCATTAAAATACCAGATGTTCTTGTGCCTTATTGTGGTTTTGACATGATAGATTAA Protein sequence : MLQLQAIREQKDEIIIALKKRNIDAAPLLENVLSLDEKRRDAQTKLDNTLAESNKLSKEIGMLFKSGKASEATVLKERTV VLKEESKTYQEELNTVAEELQSLLYQIPNVPHPSVPAGNTDEDNEEIFREGDIPELIEGALPHWELAKKYDIIDFELGVK IAGAGFPVYKGKGARLQRALIAYFLDKNTAAGYQEIQVPHLVNETSGYGTGQLPDKEGQMYHVTADDLYLIPTAEVPVTN IFRNTIVNQKDFPITYTGYTPCFRREAGSYGAHVRGLNRLHQFDKVELVRVEHPDNSYAALDGMVEHIKDILRELKLPYR LLRLCGGDLGFTSALTFDFEVFSTAQDRWLEISSASNFEAYQANRLKLRFKDENGKSQFAHTLNGSSLALPRVLAGILEN YQTEKGIKIPDVLVPYCGFDMID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-73 | 42 |
