|
Name : Bacsa_2536 (Bacsa_2536) Accession : YP_004259546.1 Strain : Bacteroides salanitronis DSM 18170 Genome accession: NC_015164 Putative virulence/resistance : Resistance Product : small GTP-binding protein Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0480 EC number : - Position : 2954249 - 2956174 bp Length : 1926 bp Strand : + Note : COGs: COG0480 Translation elongation factors (GTPase); InterPro IPR005225:IPR005517:IPR000640:IPR000795:IPR004161; KEGG: bfr:BF0141 tetracycline resistance protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, doma DNA sequence : ATGAATATTATAAATTTAGGAATTCTTGCTCACATTGATGCAGGAAAAACTTCCGTAACCGAGAATCTGCTGTTTGCCAG TGGAGCAACGGAAAAGTGCGGCCGTGTGGATAATGGTGACACCATAACAGACTCTATGGATATAGAGAAACGTAGAGGAA TTACTGTCCGGGCTTCTACGACATCTATTATCTGGAACGGGGTGAAATGCAATATCATTGACACTCCGGGACACATGGAT TTTATTGCGGAAGTGGAGCGGACATTCAAAATGCTTGATGGAGCAGTCCTCATCTTATCCGCAAAGGAAGGCATACAAGC GCAGACAAAGTTGCTGTTCAATACTTTACAGAAGCTGCAAATCCCGACAATTATATTTATCAATAAGATTGACCGTGCCG GTGTGAATTTGGAGCGTTTGTATCTGGATATAAAAACAAATCTGTCGCAAGATGTCCTGTGTATGCAAACTGTTGTCGAT GGATCGGTTTATCCAGTTTGCTCCCAAACATATATAAAGGAAGAATACAAAGAATTTGTATGCGACCATGACGACAACAT ATTGGAACGATATTTGGCGGATAGCGAAATTCCACCGACTGATTATTGGAATACGATAATCGCTCTTGTGGCAAAAGCCA AAGTCTATCCGGTGCTACATGGATCAGCAATGTTCAATATCGGCATCAATGAGTTGATGGACGCCATCACTTCTTTTATA CTTCCTCCGGCATCAGTCTCAGACAGACTTTCAGCTTATCTCTATAAGATAGAGCATGACCCCAAAGGACATAAAAGAAG TTTTCTAAAAATAATTGACGGAAGTCTGAGACTTAGAGACGTTGTAAGAATCAACGATTCGGAAAAATCCATCAAGATTA AAAATCTGAAAACTATTTATCAGGGCAGAGAGATAAATGTTGATGAAGTGGGTGCCAATGATATCGCGATTGTAGAGGAT ATGGAAGATTTTCGAATCGGAGATTATTTAGGTGCTGAGCCTTGTTTGATTCAAGGATTATCTCATCAGCATCCCGCTCT CAAATCCTCCGTCCGGCCAGACAAGCCCGAAGAGAGGAGCAAGGTTATATCCGCTCTGAATACATTGTGGATTGAAGACC CGTCTTTGTCCTTTTCCATAAACTCATATAGCGATGAATTGGAAATCTCGTTATATGGTTTGACCCAAAAGGAAATCATA CAGACATTGCTGGAAGAACGGTTTTCCGTCAAGATCCATTTTGATGAGATCAAGACTATCTACAAAGAACGACCTGTAAA AAAGGTCAATAAGATTATTCAGATCGAAGTGCCACCCAACCCTTATTGGGCCACAATAGGGCTGACTCTTGAACCCTTGC CGTTAGGGACAGGGTTGCAGATCGAAAGTGACATCTCCTATGGTTATCTGAACCATTCTTTTCAAAATGCCGTTTTTGAA GGAATCCGTATGTCTTGCCAATCAGGATTACATGGATGGGAAGTGACAGATCTGAAAGTGACTTTTACTCAAGCCGAATA TTATAGCCCGGTAAGTACACCTGCTGATTTCAGGCAGCTGACCCCTTATGTCTTCAGGCTGGCTTTGCAACAGTCAGGTG TGGACATTCTCGAACCGATGCTATATTTTGAGTTGCAGATACCCCAGGAGGCAAGTTCCAAAGCTATTACAGATTTGCAA AAAATGATGTCTGAGATTGAAGACATCAGTTGCAATAATGAGTGGTGTCATATTAAAGGGAAAGTTCCATTAAATACAAG TAAAGACTATGCCTCAGAAATAAGTTCATACACTAAGGGCTTAGGCATTTTTATGGTTAAGCCATGCGGGTATCAAATAA CAAAAGGCGGTTATTCTGATAATATCCGCATGAACGAAAACGATAAACTTTTATTCATGTTTCAAAAAACAATGTCATCA AAATAA Protein sequence : MNIINLGILAHIDAGKTSVTENLLFASGATEKCGRVDNGDTITDSMDIEKRRGITVRASTTSIIWNGVKCNIIDTPGHMD FIAEVERTFKMLDGAVLILSAKEGIQAQTKLLFNTLQKLQIPTIIFINKIDRAGVNLERLYLDIKTNLSQDVLCMQTVVD GSVYPVCSQTYIKEEYKEFVCDHDDNILERYLADSEIPPTDYWNTIIALVAKAKVYPVLHGSAMFNIGINELMDAITSFI LPPASVSDRLSAYLYKIEHDPKGHKRSFLKIIDGSLRLRDVVRINDSEKSIKIKNLKTIYQGREINVDEVGANDIAIVED MEDFRIGDYLGAEPCLIQGLSHQHPALKSSVRPDKPEERSKVISALNTLWIEDPSLSFSINSYSDELEISLYGLTQKEII QTLLEERFSVKIHFDEIKTIYKERPVKKVNKIIQIEVPPNPYWATIGLTLEPLPLGTGLQIESDISYGYLNHSFQNAVFE GIRMSCQSGLHGWEVTDLKVTFTQAEYYSPVSTPADFRQLTPYVFRLALQQSGVDILEPMLYFELQIPQEASSKAITDLQ KMMSEIEDISCNNEWCHIKGKVPLNTSKDYASEISSYTKGLGIFMVKPCGYQITKGGYSDNIRMNENDKLLFMFQKTMSS K |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU05_0922 | YP_001198287.1 | translation elongation factor (GTPases) | Not tested | 89K | Protein | 2e-102 | 42 |
| SSU98_0928 | YP_001200485.1 | translation elongation factor (GTPases) | Not tested | 89K | Protein | 2e-102 | 42 |
| tet(W) | YP_005160006.1 | tetracycline resistance protein | Not tested | Not named | Protein | 3e-99 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Bacsa_2536 | YP_004259546.1 | small GTP-binding protein | Z21523.gene.p01 | Protein | 0.0 | 97 |
| Bacsa_2536 | YP_004259546.1 | small GTP-binding protein | AJ514254.gene.p01 | Protein | 0.0 | 60 |
| Bacsa_2536 | YP_004259546.1 | small GTP-binding protein | L42544.gene.p01 | Protein | 8e-137 | 49 |
| Bacsa_2536 | YP_004259546.1 | small GTP-binding protein | AJ295238.gene.p01 | Protein | 2e-107 | 43 |
| Bacsa_2536 | YP_004259546.1 | small GTP-binding protein | AY485126.gene.p01 | Protein | 2e-102 | 42 |
| Bacsa_2536 | YP_004259546.1 | small GTP-binding protein | NC_002758.1120355.p0 | Protein | 1e-106 | 42 |
| Bacsa_2536 | YP_004259546.1 | small GTP-binding protein | M85225.gene.p01 | Protein | 1e-105 | 42 |
| Bacsa_2536 | YP_004259546.1 | small GTP-binding protein | NC_009782.5559075.p0 | Protein | 1e-106 | 42 |
| Bacsa_2536 | YP_004259546.1 | small GTP-binding protein | DQ294299.gene.p01 | Protein | 7e-99 | 41 |
| Bacsa_2536 | YP_004259546.1 | small GTP-binding protein | AJ222769.gene.p01 | Protein | 6e-100 | 41 |
| Bacsa_2536 | YP_004259546.1 | small GTP-binding protein | AM180355.1.gene636.p | Protein | 5e-97 | 41 |
| Bacsa_2536 | YP_004259546.1 | small GTP-binding protein | X04388.gene.p01 | Protein | 2e-99 | 41 |
| Bacsa_2536 | YP_004259546.1 | small GTP-binding protein | FN594949.1.gene24.p0 | Protein | 8e-97 | 41 |
| Bacsa_2536 | YP_004259546.1 | small GTP-binding protein | L09756.gene.p01 | Protein | 4e-99 | 41 |
| Bacsa_2536 | YP_004259546.1 | small GTP-binding protein | L20800.gene.p01 | Protein | 2e-109 | 41 |
