|
Name : Bacsa_0192 (Bacsa_0192) Accession : YP_004257276.1 Strain : Bacteroides salanitronis DSM 18170 Genome accession: NC_015164 Putative virulence/resistance : Virulence Product : Lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 231496 - 233226 bp Length : 1731 bp Strand : - Note : COGs: COG1190 Lysyl-tRNA synthetase (class II); HAMAP: Lysyl-tRNA synthetase, class II; InterPro IPR002313:IPR004365:IPR004364; KEGG: bth:BT_2122 lysyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA DNA sequence : ATGAACGTATTAGAACTAAGTGAACAGGAAATTATCAGACGCAACAGTCTGAATGAACTGAGAGCGATGGGCATCAATCC GTACCCTGCTGCCGAGTATGTAACCAATGCATTTTCAACCGATATAAAAGCCGAATTCAAGGATGATGAGGCAGAACCGC GCAAAGTATCAGTTGCAGGACGCATGATGTCGCGCCGTGTAATGGGAAAAGCTTCTTTCATCGAACTACAAGACTCGAAA GGACGTATCCAAGTATATATCACCCGCGATGACATCTGTCCGGATGAAAACAAAGACTTATACAATGTAGCATTCAAACG CTTGCTCGACTTAGGCGACTTCATCGGCATTGAAGGTTTTGTATTCCGAACTCAGATGGGAGAAATATCCATCCATGCGC AGAAGCTGACCGTGCTGGCGAAATCGCTCCGCCCGCTTCCCATTGTAAAATACAAGGATGGCGTGGCGTATGACAAGTTC GAAGACCCCGAACTGCGCTATCGCCAACGCTACGTGGACCTGATAGTAAATGACGGAGTGAAAGACATCTTCCTGCAACG CGCTACGGTGATACGTACCATCCGCCGCGTACTGGACGAAGCCGGCTATACGGAGGTAGAGACCCCTACCTTGCAGAACA TTGCAGGCGGTGCAAGCGCCAAGCCCTTCATTACCCACTTCAACGCTCTTGATACCGACATGTACCTGCGTATCGCTACG GAGCTTTACCTGAAGCGGCTCATCGTGGGCGGATTCGAAGGTGTATACGAAATCGGCAAGAACTTCCGCAACGAAGGCAT GGACCGCAATCATAATCCGGAGTTCACTTGTATGGAACTGTACGTACAGTATAAGGATTACAACTGGATGATGGCATTCA CCGAGAAGCTGTTGGAAACCGTCTGCATCGCTGTAAACGGAAAGCCCGAACGTGAAATTGACGGAAACATCATCAGCTTC AAGGCGCCTTACCGCCGCTTGCCTATCCTGGAAGCCATCAAAGAAAAGACCGGCTATGACCTGACTGGCATGGACGAGGC ACAAATCCGCGAAGTGTGCCAAAAGCTGAACATGGAAATCGACGACACCATGGGCAAGGGCAAGCTGATTGATGAAATCT TCGGCGAGTTCTGCGAAGGCACCTTTATACAACCCACGTTCATCACCGATTATCCCGTAGAGATGTCGCCCCTTACCAAG ATGCACCGCTCGAAACCCGGACTGACCGAACGTTTCGAACTGATGGTAAACGGGAAAGAGCTTGCCAATGCATACTCGGA ACTGAATGACCCGATAGACCAGGAAGAACGCTTCAAGGAACAGATGCGCTTAGCCGACAAAGGCGATGATGAAGCGATGA TTATTGACCAGGACTTCTTGCGTGCCCTGCAATACGGTATGCCTCCTACAAGCGGTATCGGAATCGGCATCGACCGTCTG GTTATGCTTATGACGGGCAAGACTTTCATTCAGGAAGTATTGTTCTTCCCGCAGATGCGTCCCGAAAAGGTGGTCCCTAA AGACAAAACTGAAAAATTTACTGCTTTAGGCATTCCTGAAGAATGGGTCCCGCTTATCCAAAAAGCAGGATATAATTTGG TATCAGACATGAAAGAAGTTAATCCGCAAAAGCTGCAAATGGACATCTGCGGAGTAAACAAGAAATATAAATTGGGACTG GCTAATCCAAGTGTTGACGAAATCGCAGCATGGATAAGTAAAATCATGTAA Protein sequence : MNVLELSEQEIIRRNSLNELRAMGINPYPAAEYVTNAFSTDIKAEFKDDEAEPRKVSVAGRMMSRRVMGKASFIELQDSK GRIQVYITRDDICPDENKDLYNVAFKRLLDLGDFIGIEGFVFRTQMGEISIHAQKLTVLAKSLRPLPIVKYKDGVAYDKF EDPELRYRQRYVDLIVNDGVKDIFLQRATVIRTIRRVLDEAGYTEVETPTLQNIAGGASAKPFITHFNALDTDMYLRIAT ELYLKRLIVGGFEGVYEIGKNFRNEGMDRNHNPEFTCMELYVQYKDYNWMMAFTEKLLETVCIAVNGKPEREIDGNIISF KAPYRRLPILEAIKEKTGYDLTGMDEAQIREVCQKLNMEIDDTMGKGKLIDEIFGEFCEGTFIQPTFITDYPVEMSPLTK MHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERFKEQMRLADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRL VMLMTGKTFIQEVLFFPQMRPEKVVPKDKTEKFTALGIPEEWVPLIQKAGYNLVSDMKEVNPQKLQMDICGVNKKYKLGL ANPSVDEIAAWISKIM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-99 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Bacsa_0192 | YP_004257276.1 | Lysyl-tRNA synthetase | VFG1668 | Protein | 3e-99 | 46 |
