Gene Information

Name : Deipr_0731 (Deipr_0731)
Accession : YP_004255508.1
Strain : Deinococcus proteolyticus MRP
Genome accession: NC_015161
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 753528 - 756086 bp
Length : 2559 bp
Strand : -
Note : COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR003593:IPR017730:IPR004176:IPR003959:IPR 013093:IPR019489; KEGG: dra:DR_1046 ATP-dependent Clp protease, ATP-binding subunit ClpB; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Cl

DNA sequence :
TTGAATCCTGAACGCTTTACCGAAAGCTCGACCCAGGCCATTGCCGCCGCGCAGCAGCTCGCGCAGCAAAATGGGCAGCA
GACGCTCACGCCCGCGCACCTGATGCGGACCCTGCTCGACAACGACACGGCGGCCCGCGCCCTGACGCTGGCAGGGGCCG
ACCTGCCTGCGCTGCGGGCCAGCCTGGACACGCAGCTGGGCAAACTGCCCCGTGTGCAGGGCGGCACGGGCCAACTGTAT
ATGGACAATGCGCTTCAGCGTGCCTTTCAGAAGGCCGATACGCTGGCCGAACAGCTGGGCGATTCCTTTGTGGCCGCCGA
CGTGCTGCTGCTGGCAGTGCGCGGTGAGATGAATGACCGCCACCTGCCCGGCGAGGCGGACCTGAACCGCGCCGTCAACG
AACAAAGAAAGGGGAAAATCGTGACCGACAAATCCAGTGAGGCGCAGTTTGACGCGCTCAACAAATACGGCACCGACCTG
ACCGCACGGGCCAGGGACGGCAAATTCGACCCCGTGATTGGCCGCGACGAGGAAATCCGCCGCGCCATGCAGATTCTGCT
GCGCCGCACCAAGAACAACCCGGTTCTGATTGGCGAACCCGGCGTGGGCAAGACCGCCATTGCCGAGGGCCTCGCCATGC
GGATCGTGAGCGGCGACGTGCCCGACGGCCTCAAGGACAAGCGCATCGTGAGCCTGGAAATGGGCAGCCTGCTGGCTGGG
GCCAAGTTCCGGGGCGAGTTCGAGGAACGGCTCAAGGGCGTGATCGACGAAGTGGTGCAGTCCGCGGGCGAAATCATCCT
GTTTGTGGACGAAATCCACACCATCGTGGGCGCAGGCAAGACCGAGGGCAGCCCCGACGCGGGCAACATGCTCAAGCCTG
CGCTGGCACGCGGCGAGCTGCACCTCATCGGCGCAACCACCCTGGACGAGTACCGCGAAATCGAGAAAGACCCCGCGCTG
GAGCGCCGCTTTCAGCCTGTATTTGTAGATGAACCAAGCGTAGAAGACACCATCTCCATCCTGCGCGGCATCAAGGAGCG
CTATCAGGTTCATCACAACGTGGAAATCACCGACCCCGCGCTGGTGGCCGCCGCGCAGCTTTCCAATCGCTACATCACCG
ACCGCCAACTGCCCGACAAGGCGATTGACCTGATTGACGAGTCCGCCGCCCGTCTGCGGATGGCGCTGGAATCCAGCCCT
GAGCGGATTGACCAGCTGCAGCGCCGCAAGCTGCAACTGGAAATTGAGCGTGAGGCCCTCAAGAAAGAGAAAGACCAGGA
CAGCGTGGCTCGCCTGAGCGACATTGAAGGCCAACTGAAGACCCTGACCGACGAGCTGACCGAAACCCGCTCCCGCTGGG
AAGCCGAGCGCGGCGAAGTGGGCAAATTGCGCGAGAAGCGCGAGGCGCTGGACGCCGTCCGCACCGATATCGAGCGGGCC
AGGCGCGACTACGACCTGCAAAAAGCCGCCGAGCTGGAATACGGTGAACTGCCCAAGCTGGAAAAAGAAGTGCAGGCGCT
GGAGCAGCAGCTCAAGGGCGCAGAGTTTGCCCACACCGAAGTCACCGAAGAGGACATCGCCTCGGTGGTGAGCCGCTGGA
CCGGCATTCCCGTCAGTAAGCTGATGGAGGGCGAGCGCGAGAAGCTGCTGCACCTGGAAGACCAACTGCACCGCCGCGTG
ATTGGCCAGGAGCGGGCCATCGCCTCGGTGGCCGACACCATCCGCCGCGCCCGCGCGGGCCTGAACGACCCCAACCGCCC
GCTGGGCAGCTTCATGTTCCTCGGCCCGACAGGGGTGGGCAAGACCGAGCTGGCAAAAGCGCTGGCCGAGTTCCTCTTCG
ACAGCAGCGACGCGATGGTGCGGATTGACATGTCCGAGTACATGGAAAAACACACCGTGGCCCGCCTCATCGGTGCCCCT
CCCGGATACGTGGGCTACGAGGAAGGTGGTCAGCTCACCGAGGCCGTGCGCCGCCGCCCCTACAGCGTGATCCTGCTGGA
CGAAATCGAAAAAGCCCACCCTGACGTGTTCAACGTGCTGCTGCAAGTGCTGGACGATGGCCGCCTGACCGACGGACAGG
GCCGCACAGTGGACTTCCGCAACACCCTGATTATCCTGACCAGCAACATTGGCAGCCCGCTGATTCTGGAAATGCAGGCG
CAGGGCCAGCAGCCGGACGACATCCGTAACGCCGTGCTGGAAGAACTGCGCGGGCACTTCCGCCCCGAGTTCCTGAACCG
GGTAGACGACATCATCGTGTTCGATGCCCTCACCGCCGAGAACCTGCGGCAGATTGTGGATATCCAGCTGGGTGGCCTGC
GTAAGCGCCTGGCCGAGCGCCGCGTGACCCTCAACCTTACCGACGCCGCCAAGGACCGCCTGGCCGCCGTGGGCTACGAC
CCCGCCTTCGGAGCGCGTCCGCTCAAGCGGGCCATCAGCCGCGAGATTGAAACCCCGCTGGCCCGCCGCATCCTGGCTGG
CGATGTGCCCGACAACTCGGTACTGAACGTGGGGTATGAAAATGGGGAGTTTAACTTTGAAGCGGGCGCACTGAACTGA

Protein sequence :
MNPERFTESSTQAIAAAQQLAQQNGQQTLTPAHLMRTLLDNDTAARALTLAGADLPALRASLDTQLGKLPRVQGGTGQLY
MDNALQRAFQKADTLAEQLGDSFVAADVLLLAVRGEMNDRHLPGEADLNRAVNEQRKGKIVTDKSSEAQFDALNKYGTDL
TARARDGKFDPVIGRDEEIRRAMQILLRRTKNNPVLIGEPGVGKTAIAEGLAMRIVSGDVPDGLKDKRIVSLEMGSLLAG
AKFRGEFEERLKGVIDEVVQSAGEIILFVDEIHTIVGAGKTEGSPDAGNMLKPALARGELHLIGATTLDEYREIEKDPAL
ERRFQPVFVDEPSVEDTISILRGIKERYQVHHNVEITDPALVAAAQLSNRYITDRQLPDKAIDLIDESAARLRMALESSP
ERIDQLQRRKLQLEIEREALKKEKDQDSVARLSDIEGQLKTLTDELTETRSRWEAERGEVGKLREKREALDAVRTDIERA
RRDYDLQKAAELEYGELPKLEKEVQALEQQLKGAEFAHTEVTEEDIASVVSRWTGIPVSKLMEGEREKLLHLEDQLHRRV
IGQERAIASVADTIRRARAGLNDPNRPLGSFMFLGPTGVGKTELAKALAEFLFDSSDAMVRIDMSEYMEKHTVARLIGAP
PGYVGYEEGGQLTEAVRRRPYSVILLDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIILTSNIGSPLILEMQA
QGQQPDDIRNAVLEELRGHFRPEFLNRVDDIIVFDALTAENLRQIVDIQLGGLRKRLAERRVTLNLTDAAKDRLAAVGYD
PAFGARPLKRAISREIETPLARRILAGDVPDNSVLNVGYENGEFNFEAGALN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-118 43
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 3e-108 42
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-108 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deipr_0731 YP_004255508.1 ATP-dependent chaperone ClpB VFG2084 Protein 6e-114 44
Deipr_0731 YP_004255508.1 ATP-dependent chaperone ClpB VFG0079 Protein 6e-136 43
Deipr_0731 YP_004255508.1 ATP-dependent chaperone ClpB VFG2076 Protein 4e-127 42