|
Name : Deipr_0516 (Deipr_0516) Accession : YP_004255300.1 Strain : Deinococcus proteolyticus MRP Genome accession: NC_015161 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.3 Position : 526827 - 528803 bp Length : 1977 bp Strand : - Note : COGs: COG0021 Transketolase; InterPro IPR005474:IPR005475:IPR005476:IPR005478; KEGG: dge:Dgeo_2283 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; PRIAM: Formaldehyde transketolase; DNA sequence : ATGTCCGACCAGAACCTGGAACAGCTGAGCATCAACACCATCCGCACCCTTGCCATAGACGCGGTGCAGGCGGCCAACTC CGGCCACCCCGGCGCGCCGCTGGGCATGGCCCCGATGGGGTACACGCTCTGGCAGCGCTTCTTGCGTCACAACCCTGCCA ACCACCGCTGGCCGGGCCGGGACCGCTTTGTGCTGTCGGCGGGGCACGCGTCCATGCTCATCTACTCCCTGCTGCACCTG ACCGGTTACCCCAAGATGACCTTGCAGGAGCTCAAAGACTTCCGCCAGTGGGACAGCCAGACGCCGGGGCACCCCGAGTT CTTCCATACCGACGGCCTGGACGCCACCACCGGGCCGCTGGGTCAGGGCATTGCGATGACCGTGGGCATGGCGATGGCCG AAGCGCACCTGGCCGCCCGCTACAACCGAGAGGGCTTCCCGGTGTTCGACAACTACACCTACGCCATCTGCGGCGACGGC GACCTGCAAGAAGGCGTGAGCCACGAGGCCGCCGCGCTGGCCGGGCACCTGGGCCTGGGCAAGCTGATTTGGCTGCACGA CGACAACGAAGTTCAGCTGGACACCATGGTCGCCAAGGCCGATTCCGAGCGGATGCGGCTGCGCTTCGAGGGCTACGGCT GGCAGGTGCTGAAGGTCGAGGACGGCAACGATGTCGGGGCGATTGCGGCCGCCATCGAGCAGGCCCGCGCCGAAACCGCC AAGCCCACCCTGATTCAGGTCCGTACAGTCATCGGCTTCGGCAGCCCGCGTGCCGGCACCCCCAAGGCGCACGGTGAGCC GCTGGGCGACGAGGGCGTCACCAAGACCAAGCAGGCGCTGGGCTGGGACCACCCCGCCTTTACCGTGCCCGCCGAGGTGG CCGAGCACATGAGCGCCCTGAAGCGCGGCGCGGCGCAGCAGGCCGAGTGGGAAGAGATGATGAACCGCTACCGCGCCGAA TATCCCGAACTGGGCCAAGAGGTGGACGACCTGCTGGAGCGCGAGCTGCCGGACAACCTGTGGGGGGCACTGCCGCAGTG GGAAGCGGGCAGCAAGGCCCAGGCCACCCGCTCCAGCAGCGGCGAAGTCATCAATGCCCTGGCTCCGCTGGTGCCGGGGC TGGTGGGCGGCTCGGCCGACGTATCGGGCAGCACCAAGACGGCCATCAGCGACTCGGAGCACATGCAGGCAGGCAACTAC GCCGGGCGCAATGTGTACTTCGGCGTGCGCGAGTTCGGCATGAGCGCCGCCGCGAACGGCATGAGCCTGTACGGCGGCCT GCGCCCGCTGGTGGGCACCTTCATGGTGTTCAGCGATTATCTCAAGCCGGCCTACCGCCTCAGCGCCCTGCAGATGCAGC CGGTGACCTACGTGCTGACCCACGACAGCGTGGGCCTGGGCGAGGACGGCCCCACCCACCAGCCGGTCGAGCAGCTGGCG ATGCTGCGGGCCGTGCCGGGCGCCCATGTGTTCCGCCCCGCCGACGCCAACGAGACCGCCGCCGCCTGGGCGCTGGCGCT GGAATACAAAAAAGGCCCCACAGCGCTGGTGCTCTCGCGCCAGAACCTGCCGGTGCTGCCTGCCAACCATGCGGGCGTGA AGAAAGGCGCCTACGTGGTCCGGGACGCCGAAAATGCCGCCGTGACCCTGCTGGCGACCGGCTCGGAAGTGGCGCTGGCC CTGGACGCCGCCGAAGCGCTGGCCGGCGAAGGCGTGGCTGCCCGCGTGGTGTCCATGCCCTGCTTCGAGCTGTTCCGCGA GCAGGACAGGGAGTACCGCCGCGAGGTGCTGGGCACGGCCCCCCGCGTGGCGATTGAGGCCGCCGCCAGCCAGCCCTGGT TCGAGTGGGTCGGCACGGAGGGCGGCCTGGTCACGCTGGACCGTTTCGGCGCGTCCGCCCCCGGCGAAGTGGTGCTGGAA AAGCTGGGCTTCAGCGTACAGAACGTGGTCAAGGTGGTCCGGGAAACCATCGGCTGA Protein sequence : MSDQNLEQLSINTIRTLAIDAVQAANSGHPGAPLGMAPMGYTLWQRFLRHNPANHRWPGRDRFVLSAGHASMLIYSLLHL TGYPKMTLQELKDFRQWDSQTPGHPEFFHTDGLDATTGPLGQGIAMTVGMAMAEAHLAARYNREGFPVFDNYTYAICGDG DLQEGVSHEAAALAGHLGLGKLIWLHDDNEVQLDTMVAKADSERMRLRFEGYGWQVLKVEDGNDVGAIAAAIEQARAETA KPTLIQVRTVIGFGSPRAGTPKAHGEPLGDEGVTKTKQALGWDHPAFTVPAEVAEHMSALKRGAAQQAEWEEMMNRYRAE YPELGQEVDDLLERELPDNLWGALPQWEAGSKAQATRSSSGEVINALAPLVPGLVGGSADVSGSTKTAISDSEHMQAGNY AGRNVYFGVREFGMSAAANGMSLYGGLRPLVGTFMVFSDYLKPAYRLSALQMQPVTYVLTHDSVGLGEDGPTHQPVEQLA MLRAVPGAHVFRPADANETAAAWALALEYKKGPTALVLSRQNLPVLPANHAGVKKGAYVVRDAENAAVTLLATGSEVALA LDAAEALAGEGVAARVVSMPCFELFREQDREYRREVLGTAPRVAIEAAASQPWFEWVGTEGGLVTLDRFGASAPGEVVLE KLGFSVQNVVKVVRETIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 3e-114 | 48 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 2e-106 | 45 |
