|
Name : Deipr_0490 (Deipr_0490) Accession : YP_004255275.1 Strain : Deinococcus proteolyticus MRP Genome accession: NC_015161 Putative virulence/resistance : Unknown Product : Seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 499699 - 500970 bp Length : 1272 bp Strand : - Note : COGs: COG0172 Seryl-tRNA synthetase; HAMAP: Seryl-tRNA synthetase, class IIa; InterPro IPR015866:IPR002314:IPR002317; KEGG: dra:DR_1276 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Seryl-tRNA synthetase, DNA sequence : ATGCAAGACATCCGCTTTATCCGCGAGAACCCTGACACCGTCCGCAAGGCGATTGCCGACAAATTCGTGTCGCTGGACCT GGACGCAGTGCTGGCCGCCGACCGCGCCGTGCTGGAACTGCGCCAGCAGGTGGAAACTCTGCAAGCCGAGCGCAACGCCA ACGCCAAACTGGTCCCCAAGGCCAGCGCCGAAGAACGCCCCGCCCTGATTGAAAAGGGCAAGGCACTGGGCGCCCAGCTG GCCGAGCTTGAGCCCCAGCTGCGTGAACAGGAAGAGGCGCTGCGCTCCTTGCTGCTGCGGGTGCCCAACGTGCCCCACGG GTCGGCCCCGGTCGGCCCCAGCGACGACGACAACGTAGAACTGCGCCGCGAGGGCCAGCTGCCCACCTTCAAATTTCAGC CGCTGGACCACGTGGACCTGCTGGAATTGCAGGGCTGGTCCGATCCCGAGCGGGTGGCCCGCGTGTCGGGCAGCCGCTCG TACCTGCTGAAGGGCGAAGCGGCCCGGCTGGAAATGGCGATTTTGACCTTCGCGCTGGACTTCCTGGCCGAGCGCGGCTT GGAGATGCTCAGCACCACCGCGTTGGTGCGCCCCGAAACCCTGACCGCCACCGGCCATTTCCCCGGCGGCGAGGACCAGG TGTATCGCCTGGAGGACGAGGAGCTGATGCTGGCCGGCACCAGCGAGGTGCCGATCAACTCCCTGTACGCCGGCGAAATC CTGGCCGAGAGCGACCTGCCGCTGGCCTTCGCGGGCTTCAGCGCCGCGTTCCGCTCCGAAGCAGGCAGTGCCGGGCGTGA CGTGCGCGGCCTGATTCGGGTCCACGAGTTCCGCAAGGTGGAGCAGTACGTGATTTGCCGGCCCGAAGACGGCATGGCCT GGTTCGAGAAACTGCTGGCCAACGCCGAGGGTATCTTGCAGGCGCTGGAGTTGCCCTACCGGGTGGTGCAGAACTCTACC GGCGACATGGGCCTGGGCAAGCACCTGATGATGGACATCGAAACCTGGGTGCCCAGCGAGGAAAAGTACCGCGAAACCCA CTCCTGCTCGTACCTGACCGACTGGCAGGCCCGCCGCACCGGCCTGCGCTTCAAGGGCGCGGACGGCAAGCCTCAGTTTG CCCATACCCTCAACAACACCGGCATCGCCAGCCCGCGCATTCTGGTGCCGTTCCTGGAAAACCACCAGCAGGCCGACGGC ACGGTGCGGATTCCGGCAGCGCTGCAACCCTATCTGGGCGGCAAAGCGGTGATTGGGCAGCCCCGGCGCTAA Protein sequence : MQDIRFIRENPDTVRKAIADKFVSLDLDAVLAADRAVLELRQQVETLQAERNANAKLVPKASAEERPALIEKGKALGAQL AELEPQLREQEEALRSLLLRVPNVPHGSAPVGPSDDDNVELRREGQLPTFKFQPLDHVDLLELQGWSDPERVARVSGSRS YLLKGEAARLEMAILTFALDFLAERGLEMLSTTALVRPETLTATGHFPGGEDQVYRLEDEELMLAGTSEVPINSLYAGEI LAESDLPLAFAGFSAAFRSEAGSAGRDVRGLIRVHEFRKVEQYVICRPEDGMAWFEKLLANAEGILQALELPYRVVQNST GDMGLGKHLMMDIETWVPSEEKYRETHSCSYLTDWQARRTGLRFKGADGKPQFAHTLNNTGIASPRILVPFLENHQQADG TVRIPAALQPYLGGKAVIGQPRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-68 | 44 |
