Gene Information

Name : Deipr_0004 (Deipr_0004)
Accession : YP_004254800.1
Strain : Deinococcus proteolyticus MRP
Genome accession: NC_015161
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 5097 - 6524 bp
Length : 1428 bp
Strand : +
Note : COGs: COG0469 Pyruvate kinase; InterPro IPR015793:IPR015795:IPR001697; KEGG: dge:Dgeo_0005 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, C-terminal-like; PRIAM: Pyruvate kinase; SPTR: Pyruvate kinase; TIGRFAM: Pyruvate kinase; IMG refer

DNA sequence :
ATGAAACACGCTTTTGGAAGGGCCACCAAGATTGTGGCCACGATGGGTCCGGCCAGCCGCAATCCGGAGACCCTGCGCCG
CATGATTGACGCCGGCATGAACGTGGCGCGGATCAACTTCAGCCACGGGGACCGCGAGGACCACCGCGCCACCGTAGAAC
TGATTCGCGAAATTGCCGCCGAGAAGGGCCGCGCCATAGGCATCTTGCAGGACCTGCAGGGACCCAAAATCCGGGTGGCC
CGCTTTGAGGACGAGGCCGGTATCCTGCTGGAGCCCGGCAACCTGTTCAGTATCACGATGGACGATGTGCTGGGCAATCA
GGAGCGGGTGGGAACGACCTACAAGCAGCTGGCACAGGACGTCACTCCTGGCATGACCCTGCTGCTGGACGACGGAAACC
TGACCCTGCAGGTGCTGAACGTGACGGCCCATGAGGTGCAGACCCGCGTGCTGGTGGGCGGCCGGCTGAAGAATAACAAG
GGCATCAACGTGCCCGAAGCCGACCTGTCGGTGCCGGCGCTGAGCGATAAGGACGTGCAGGACCTGGAATTTGGTGCTGA
ACTGGGCGTGGACTGGGTGGCGCTGAGCTTCGTGCGTTCGCGGGACGACCTGCTGCTGGCCCGCCACTACCTGACCCGTG
CCGGCAGCCGCGCCAAGCTGATGGCCAAAATCGAAAAGCCGCAGGCCGTAGAGCGGTTCAGCGAAATCCTGCGGGAGGCC
GACGGCATCATGGTGGCGCGCGGTGACCTGGGGGTGGAGATGCGCCCTGAGCAGGTGCCCACCATCCAGAAAGACCTGAT
CCGCGAGTGCCGTGAGGCAGGCAAGCCGGTCATTACGGCTACCCAGATGCTGGAAAGCATGATTAACGCTCCCCGCCCCA
CCCGCGCTGAGGCCAGTGACGTAGCCAACGCCATCTACGACGGCACCGACGCCGTGATGCTGAGTGCCGAGTCGGCGGTC
GGCCAGTACCCGGTCGAGGCTGTCGCCATGATGGACCGCATTGCCCGCGAGGTGGAGCAGAGCGAGCAGTATCAGGCGCT
GCAGCAGCTCAGCTCGCCTATCGTGGAATCCCAGGACGCCATCGCCATGTCCGCCTGCCAGATCGGGGTCAAGTTGGAAG
CGGCGGCCATCGTGGCGTTTACCTCGTCCGGCGGCTCGTCGGGCCGTATCGCCAAGTACCGCCCACCCCTGTCCATCCTG
GCGCTAACCCCTTACGAGCATGTCCGCAATCAGCAAACGCTGCTGTGGGGTGTGATTCCCATCCTGAGCGAAGACCCCCA
GGACTCTGACGATATGGTCCGCATCGCCGCCGAGGTGCTCGCCCGGAGCGGCTTGGCGGAGCGGAACGACCGCTTCGTCA
TCACGGCTGGAGTGCCTTTCGGGGTACGCGGCACCACCAACATGCTGCGCGTCGAGAAGCTGCACTAG

Protein sequence :
MKHAFGRATKIVATMGPASRNPETLRRMIDAGMNVARINFSHGDREDHRATVELIREIAAEKGRAIGILQDLQGPKIRVA
RFEDEAGILLEPGNLFSITMDDVLGNQERVGTTYKQLAQDVTPGMTLLLDDGNLTLQVLNVTAHEVQTRVLVGGRLKNNK
GINVPEADLSVPALSDKDVQDLEFGAELGVDWVALSFVRSRDDLLLARHYLTRAGSRAKLMAKIEKPQAVERFSEILREA
DGIMVARGDLGVEMRPEQVPTIQKDLIRECREAGKPVITATQMLESMINAPRPTRAEASDVANAIYDGTDAVMLSAESAV
GQYPVEAVAMMDRIAREVEQSEQYQALQQLSSPIVESQDAIAMSACQIGVKLEAAAIVAFTSSGGSSGRIAKYRPPLSIL
ALTPYEHVRNQQTLLWGVIPILSEDPQDSDDMVRIAAEVLARSGLAERNDRFVITAGVPFGVRGTTNMLRVEKLH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 1e-80 44
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 3e-81 44
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 3e-81 44
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 9e-81 44
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 3e-66 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deipr_0004 YP_004254800.1 pyruvate kinase VFG0479 Protein 1e-81 44