Gene Information

Name : Deipr_1743 (Deipr_1743)
Accession : YP_004256493.1
Strain : Deinococcus proteolyticus MRP
Genome accession: NC_015161
Putative virulence/resistance : Resistance
Product : Phosphonate-transporting ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.28
Position : 1850531 - 1851283 bp
Length : 753 bp
Strand : -
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: sti:Sthe_3460 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type

DNA sequence :
ATGACTGCATTGACCCGTACCGTTCCCGCTTTCGTTCCGCCTGTGACCGCTGCCCCTACCCTCGCCATGCGCGGTGTGAG
CAAAGTATTTGGTGACGGCGACAGTCAGGTGACGGCGCTGCACCCCACCGACTTTGAGGTCTATCCCGGCGAGCTGGTGG
CCGTGATTGGTCCCAGCGGCAGCGGCAAGAGCACCTTCCTCACCCTGGCCGGCGCCCTGCAGATCCCCACGGACGGCAGC
GTGACCATCGCCGGGCAGGAGCTGAGCCGCCTGAATCCCCGCCAGCTGGCCGATTTCCGGCTGCACCACATCGGCTTCGT
GCTGCAGGCCAGCAACCTGATTCCATACCTGAACGTGCGCGAACAGCTGACGCTGGTGCCGGGGCTGGCCGGCCGGGGCG
GAGCGCAGGCCCGCACCCTGGCCGACGAACTGCTCGGCAGCCTGGGCCTGGCGGAGCGGGCCGGGCACTACCCGCAGCAG
CTATCGGGCGGGCAAAAGCAGCGTGTGGCGATTGCGCGGGCGCTGATGAACGACCCCCAGCTGATTCTGGCCGATGAGCC
TACCGCTGCCCTGGACGGCGTGCGCGGCCGCGAAGTGGTGACCATGCTGGCCCGCGAGGTCCGGGAGCGCGGCAAGGCTG
CCGTGATGGTCACCCACGACGAGCGCGTGCTGGACCTGTGCACCCGCGTGGTGCGCCTGGAAGACGGCCACGTGACTGGG
GCGGGCACCGCGCAGGAATTGGCTGCCGACTGA

Protein sequence :
MTALTRTVPAFVPPVTAAPTLAMRGVSKVFGDGDSQVTALHPTDFEVYPGELVAVIGPSGSGKSTFLTLAGALQIPTDGS
VTIAGQELSRLNPRQLADFRLHHIGFVLQASNLIPYLNVREQLTLVPGLAGRGGAQARTLADELLGSLGLAERAGHYPQQ
LSGGQKQRVAIARALMNDPQLILADEPTAALDGVRGREVVTMLAREVRERGKAAVMVTHDERVLDLCTRVVRLEDGHVTG
AGTAQELAAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 5e-40 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 44
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 1e-44 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-32 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deipr_1743 YP_004256493.1 Phosphonate-transporting ATPase CP001581.1.gene798.p Protein 7e-39 44
Deipr_1743 YP_004256493.1 Phosphonate-transporting ATPase NC_008702.1.4606598. Protein 1e-27 43
Deipr_1743 YP_004256493.1 Phosphonate-transporting ATPase NC_012469.1.7686878. Protein 1e-36 41