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Name : Deipr_1109 (Deipr_1109) Accession : YP_004255878.1 Strain : Deinococcus proteolyticus MRP Genome accession: NC_015161 Putative virulence/resistance : Virulence Product : Lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 1171359 - 1172933 bp Length : 1575 bp Strand : - Note : COGs: COG1190 Lysyl-tRNA synthetase (class II); HAMAP: Lysyl-tRNA synthetase, class II; InterPro IPR002313:IPR004365:IPR004364; KEGG: ddr:Deide_05030 lysyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, DNA sequence : ATGTCAGACGAAGGCCAGCAGTCCGCCCCCCAGACCCCCGATTACAGCCACCTGCACGAACAGACGGTCAGCCGCCTGAA CAACCTCGCCGCCCAGGTGGAGGCCGGCTTCGAGGCGCACCCATACGCCTACGCGCAGACCCACCACAGCCGCGATGTGC TGTCCGCCCATCCTGCCCAGACTGAGGACGGCAAGTGGGAGCCGGGCCAGGAGTGGCCCGAAGAAAGCTACTCGCTGGCC GGGCGCATCACCCTGCTGCGACACATGGGCAAGGCCGCTTTTGCTGAGCTGCAAGACGAGTGGGGCAGCCTGCAGGTGTT CTTCTCCAAGAGTGACCTGGAAAGTTTCGCCGCCACCAAGAAGATTGACCTGGGTGACATCATCGGCGTGAAGGGCTATC CCTTCGTCACCAAGACCGGCCAGCTGACCCTGCACGTGACCGAGTGGCAACCACTGGTCAAGAGCCTGCACCCGCTGCCC ACCAAGTTCGGCGGCCTTCAGGACGAGGAGCTGCGTGCCCGCCGCCGCTACCTTGACCTCATCGTGAATCCCGAGCGCCG TGAAGCGTTCCGCACCCGCTCACAGGCCATCCGCTACATCCGCAACTTCCTGGACAGCCAGGGCTTTATGGAAGTGGAAG GCCCCACCCTGCAAACCGTGCCGGGCGGCACCGAGGCCACCCCGTTCCAGACGCACCACAAGGCGCTGAGCCACGATTTC AGCCTGCGTATTAGCCTGGAGCTGTACCTCAAGCGGCTGCTGGTGGGCGGCTTCGAGCGGGTGTACGAAATCGGGCGCAA CTACCGCAACGAGGGCATTGACCGTACCCACAACCCCGAATTCACCATGTTGGAAGCCTATTTCGCCTATGGCGACTACA ACGACATGATGGAACTGGTGGAGCGGATGCTGAACGGCCTGGTGAAGGAAGTCACGGGCGGCAGCGAGAAAATCACCTAT CAGGGCCGCGAGCTGGATTTCAGCCTGCCGTTTAAGCGCCTGGACTTCGTGACCGCGCTGCGTGAAAAAGCGGGCCTGGA TTTTGATCCGCTGGACCTGGGCAAGCTGCGGGCCTGGGCCGACGAAAAGCACCCCGAGATGCGCAAGGTGCCCGACTACA AGCTGCTGGACAAGCTGAGCGGCGAGTACATCGAGCCTGAGCTGCAAAGCCCCACCTTCCTGGTGGATATGCCGCTGGTC ATCAGCCCGCTGGTGAAACGGCACCGCGAGCGCGCTGGCCTGAGCGAACGGGCGGACCTGTTCGTGGGCGGCTTCGAGCT GGCGCCCATCTACTCCGAGCTGAACGATGCCCTGGACCAGCGCGCCCGCTTCGAGGCGCAGACGGCCCGCCGCGAGGCTG GCGACGACGAGGCCCACCAGCAGGACGAAGATTTCCTGCTGGCGCTGGAATACGGCATGCCGCCCACCGCTGGCATGGGC ATGGGCATGGACCGCCTCGCCATGCTGCTGACCGATTCCGACTCTATCCGCGACGTGCTGCTGTTCCCGCTGCTGCGCCC CGAAGCGGGCAGGCCAGCAGCGCAGGCAGAGGCGCAGGAAGAAATGCAGGGCTGA Protein sequence : MSDEGQQSAPQTPDYSHLHEQTVSRLNNLAAQVEAGFEAHPYAYAQTHHSRDVLSAHPAQTEDGKWEPGQEWPEESYSLA GRITLLRHMGKAAFAELQDEWGSLQVFFSKSDLESFAATKKIDLGDIIGVKGYPFVTKTGQLTLHVTEWQPLVKSLHPLP TKFGGLQDEELRARRRYLDLIVNPERREAFRTRSQAIRYIRNFLDSQGFMEVEGPTLQTVPGGTEATPFQTHHKALSHDF SLRISLELYLKRLLVGGFERVYEIGRNYRNEGIDRTHNPEFTMLEAYFAYGDYNDMMELVERMLNGLVKEVTGGSEKITY QGRELDFSLPFKRLDFVTALREKAGLDFDPLDLGKLRAWADEKHPEMRKVPDYKLLDKLSGEYIEPELQSPTFLVDMPLV ISPLVKRHRERAGLSERADLFVGGFELAPIYSELNDALDQRARFEAQTARREAGDDEAHQQDEDFLLALEYGMPPTAGMG MGMDRLAMLLTDSDSIRDVLLFPLLRPEAGRPAAQAEAQEEMQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 5e-76 | 45 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 1e-67 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Deipr_1109 | YP_004255878.1 | Lysyl-tRNA synthetase | VFG1668 | Protein | 3e-76 | 45 |
