|
Name : Odosp_0958 (Odosp_0958) Accession : YP_004252209.1 Strain : Odoribacter splanchnicus DSM 220712 Genome accession: NC_015160 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : 1.1.1.22 Position : 1135720 - 1137009 bp Length : 1290 bp Strand : - Note : COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterPro IPR017476: IPR001732: IPR014026: IPR014027; KEGG: pdi:BDI_1308 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP- DNA sequence : ATGTACAATAAATTAGTTCATAAAGAGGCCAGGTTAGCTTTGGTTGGGTTAGGTTATGTCGGTTTGCCTATAGCTCTTGA ATTTGCCAAAAAGATTTCAGTGATAGGTTTTGATATTAACGAGGAGCGTCTGACGATGATGCGCCAGGGGATAGATCCCT GTAAAGAACTGGATTCTGAAGCGTTTGAAAATGCTGATATCGAATTTACCTCTTCTATTGATGAATTGCGTAAGGCTTCC TTTTTTATTGTTGCCGTCCCTACACCGATAGACGATCATAATCAACCGGACCTGACTCCATTGCTGGGAGCAACGCGTTC GGTGGCGAAAGCCTTGAAAAAAGGGGATTATGTGGTGTATGAATCCACGGTTTATCCGGGCTGTACGGAGGAAGATTGTA TTCCTGTGCTGGAAGAAATTTCGGGACTGAAAGCCGGGGTGGATTTTAAGTTCGGTTATTCCCCCGAACGGATCAATCCG GGAGAGAAAGTCCATACCTTGCCCAATACGGTTAAAATTGTATCGGGTTGTGATCCCGAAGCCCTGGACACGATCGCCAA AGTATATGAACTGGTTGTCAAACCGGGCGTACATCGCGCACCGAATGTAAAAGTGGCCGAGGCTGCAAAAATCATCGAAA ATACTCAGCGGGATGTCAACATCGCTTTGATGAACGAACTGTCAATTATTTTCAGCCGCATCGGGATTAATACCTACGAT GTGCTGGAAGCTGCCGGGACCAAATGGAACTTCCTGAAATTCTATCCGGGGTTAGTAGGGGGCCACTGCATCGGAGTAGA CCCGTACTATCTGGTATACAAAGCCAATGAATTGAAATATCACAGTCAGATTATCAGTGCCGGACGTTTTATCAACGACA CGATGGGTGGATATATTGCTAAAAAGCTGGTGAAGAAATTGATCGGTATGGGAAAAGCGATATTGGGGGCGCGTATTTTG GTGATGGGAATGACATTTAAGGAGAATGTGGCGGATATCCGTAATTCGAAAGTGGTGGATATTATCAATGAATTGAAAGA TTTCGGAGTAGAGGTGGACGTGGTCGATCCGTATGCTGATCCGGAAGAGGTCAAAAAGATGTATGGTTTCCGTTTGATAG AAAAACCATTGGGGAATTATGACGCCGTCGTTGTTGCTGTTGCTCATGATGCTTATCAGGGATTGGATGAAAAGTATTTT AAGTCGCTGACTTGCGATAAAGCCGTGCTGGTGGATGTGAAGGGAATGTACAGGGATAAGATTCATGAGTTGAAGTATTG GAGTCTGTAG Protein sequence : MYNKLVHKEARLALVGLGYVGLPIALEFAKKISVIGFDINEERLTMMRQGIDPCKELDSEAFENADIEFTSSIDELRKAS FFIVAVPTPIDDHNQPDLTPLLGATRSVAKALKKGDYVVYESTVYPGCTEEDCIPVLEEISGLKAGVDFKFGYSPERINP GEKVHTLPNTVKIVSGCDPEALDTIAKVYELVVKPGVHRAPNVKVAEAAKIIENTQRDVNIALMNELSIIFSRIGINTYD VLEAAGTKWNFLKFYPGLVGGHCIGVDPYYLVYKANELKYHSQIISAGRFINDTMGGYIAKKLVKKLIGMGKAILGARIL VMGMTFKENVADIRNSKVVDIINELKDFGVEVDVVDPYADPEEVKKMYGFRLIEKPLGNYDAVVVAVAHDAYQGLDEKYF KSLTCDKAVLVDVKGMYRDKIHELKYWSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-100 | 58 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-92 | 50 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-92 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Odosp_0958 | YP_004252209.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 8e-93 | 50 |
