Gene Information

Name : Odosp_0864 (Odosp_0864)
Accession : YP_004252117.1
Strain : Odoribacter splanchnicus DSM 220712
Genome accession: NC_015160
Putative virulence/resistance : Unknown
Product : Formaldehyde transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : 2.2.1.3
Position : 1016433 - 1018466 bp
Length : 2034 bp
Strand : +
Note : COGs: COG0021 Transketolase; InterPro IPR005474: IPR005475: IPR005476; KEGG: pgi:PG1748 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; PRIAM: Formaldehyde transketolase; SPTR: unch

DNA sequence :
ATGAATACAACTACCAACAGAGCGGCGGACAACATCCGAATTCTGGCAGCCTCAATGGTTGAAAAAGCAAAATCAGGTCA
CCCCGGAGGAGCGATGGGTGGTGCCGATTACATCAACGTGCTATATTCTGAATTTCTGAATTTCGATCCGGACGATGGCG
AGTGGGTAAACCGGGATCGGTTTTTCCTGGACCCGGGTCATATGTCACCGATGCTTTATGCAACGTTGAGCCTGATTGGT
AAATATAGCATGGAAGATCTGAAAAACTTCCGTCAATGGGGCAGCATCACTCCCGGTCATCCCGAAGTAGACGTAAAACG
GGGTGTAGAGAATACTTCAGGTCCTCTGGGTCAGGGACATGCCATGGCCGTCGGAGCAGCTATCGCCGAACGTTTTCTGG
TAGCCCGTTTCGGTGAATGGATGGCCCACAAGACCTATGCTTTCATCTCGGACGGTGGCATTCAGGAAGAGATCTCCCAA
GGTGCAGGACGTATTGCCGGTACACTCGGACTCGCTAACCTGATCATGTTCTATGACTCGAATAATATCCAGCTTTCTAC
CAAAGTGGATGAAGTAACCCACGAAGATACAGCCAAAAAATATGAAGCCTGGGGATGGCAGGTCATCACCATCGACGGCA
ACGATGCAGCAGAAATCCGTCAGGCCCTGAAAGTGGCACAGGAAGAAAAAGAACGTCCTACACTCATCATCGGACACACC
CTGATGGGGAAAGGAGCTGTCGGTGCCAACGAAGAAGATTTCTCCAACAAAGTATCAACTCACGGACAACCGCTGAGCGC
TGCCGGAGCTTCTTTTGAAAATACGGTGGCTAACCTGGGCGGAGATCCTCAGAATCCATTCGTTATCTTCCCGGATGTAC
AGGAATATTATGCGCAGGTACTGGAAGAGAAACGGGCTCAGGCCAAACAGAAAAAAGCCGAACAAGCTGCCTGGGAAAAA
GCCAACCCGGAATTAGCAGCCAAATTCCATCGGTTTATGTCGGGAGAAGCGCCTGCTATCGATTATAAAGCTATTGCACA
CAAAGCCAATATAGCAACCCGTCAGGCTTCAGCCGATGTATTGGTTACACTGGCACAGGAAGTTGAAAATATGATCGTCA
GCTCTGCCGACCTTTCCAATTCAGATAAGACAGACGGTTTTATCAAAGGAGGAGCCCGCAACCTAGTGAAAGGAGATTTC
AGCGGTAAATTCCTGCAAGCCGGAGTTGCCGAGTTGACTATGGCTGCAATCTGTAACGGTATCGCCCTTCATGGCGGTAT
TCATGTTGCCTGCGCAACCTTCTTTGTATTCTCCGATTATATGAAGCCGGCTTTCCGTTTATCGGCTCTGATGCAGATGC
CGGTTAAATACATCTGGACCCACGATGCCTTCCGGGTCGGTGAAGACGGTCCTACCCACCAGCCGATCGAGCACGAAGCC
CAGTTGCGTCTGCTGGAAAAAATGCAGAACCACGCCGGAAAAATGAGCATGCTGGCTTTACGTCCGGCCGATGCAGCCGA
AACTTCGGTGGCCTGGAAAATGGCGATGGAAAATACCGAAACTCCGACGGCTCTCGTATTGTCCCGTCAGAATATCAACG
ATCTGCCGGCCGTAACCGACCGTTATACCGAAGCTTTAAAAGCAGAAAAAGGAGCTTACATCGTACAGAAAAACGGTGAA
AATCCCAAAGTGATCCTAATCGCATCCGGATCGGAAGTGGCCACCCTGATCGATGCCGCCAAGTTGTTACTCGAAAGAAA
AGGTATCGCTTCACAGGTTGTATCGGCTATTTCGGAAGGTTTATTCCGTCAGCAGCCGACCGCTTACCAGGAAGAAGTCA
TTCCGGCCTCTACGCCTCATTTCGGCCTGACCGCCGGTTTATCGGTAACTCTGGAAGGATTGGTCGGATGTAACGGCAAA
ATCCACGGCGTAAATCACTTCGGATATTCTGCCCCGGCCAAAGTACTGGACGAAAAGTTCGGCTTTACCGGAGAGTTTGT
ATACAACGAAATTTGCGAAATGCTCGGAAAATAA

Protein sequence :
MNTTTNRAADNIRILAASMVEKAKSGHPGGAMGGADYINVLYSEFLNFDPDDGEWVNRDRFFLDPGHMSPMLYATLSLIG
KYSMEDLKNFRQWGSITPGHPEVDVKRGVENTSGPLGQGHAMAVGAAIAERFLVARFGEWMAHKTYAFISDGGIQEEISQ
GAGRIAGTLGLANLIMFYDSNNIQLSTKVDEVTHEDTAKKYEAWGWQVITIDGNDAAEIRQALKVAQEEKERPTLIIGHT
LMGKGAVGANEEDFSNKVSTHGQPLSAAGASFENTVANLGGDPQNPFVIFPDVQEYYAQVLEEKRAQAKQKKAEQAAWEK
ANPELAAKFHRFMSGEAPAIDYKAIAHKANIATRQASADVLVTLAQEVENMIVSSADLSNSDKTDGFIKGGARNLVKGDF
SGKFLQAGVAELTMAAICNGIALHGGIHVACATFFVFSDYMKPAFRLSALMQMPVKYIWTHDAFRVGEDGPTHQPIEHEA
QLRLLEKMQNHAGKMSMLALRPADAAETSVAWKMAMENTETPTALVLSRQNINDLPAVTDRYTEALKAEKGAYIVQKNGE
NPKVILIASGSEVATLIDAAKLLLERKGIASQVVSAISEGLFRQQPTAYQEEVIPASTPHFGLTAGLSVTLEGLVGCNGK
IHGVNHFGYSAPAKVLDEKFGFTGEFVYNEICEMLGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 9e-85 41