Gene Information

Name : Odosp_0502 (Odosp_0502)
Accession : YP_004251768.1
Strain : Odoribacter splanchnicus DSM 220712
Genome accession: NC_015160
Putative virulence/resistance : Unknown
Product : type III restriction protein res subunit
Function : -
COG functional category : S : Function unknown
COG ID : COG4951
EC number : -
Position : 599534 - 602425 bp
Length : 2892 bp
Strand : +
Note : COGs: COG4951 conserved hypothetical protein; InterPro IPR002755: IPR006935: IPR014001; KEGG: pru:PRU_1107 type III restriction-modification system subunit Res; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; DNA primase, small su

DNA sequence :
ATGGATACAGGCAAACAACTAAATGCAAATGAGCTTATTGCCAAGCTTCAAGAATTAGAGAAAGAAAATGCCAGGTTAAG
AAAAATTCTTGATGTGCATGGAATACCATACATTGTAACCGAGCCTAATGTCACTACGAAAGAAAGCCTACATGCCATAT
TCCATACAGATTCAAAGCTGAGTCTACAGGAAAAGGTTGCGCTATTTCGTAGTGTTTTTCAAGGTCGTGATGATGTCTTT
GCCAAGCGTTGGTACAGTAGTACGACTCAAAAGTCAGGCTACCAACCTGTATGCACGAGGGAATGGAATCGTGAATTTTG
CGACAAGCGAAAGTACAAATGTGCGGATTGTCCCAACAGGCAATTCGCTCCTTTGGCATACAACGACTTTTTCAATCATC
TTGCAGGAAAGGATGTATGGGGACGTGATGTTATAGGACTTTATCCAATACGAAAGGACAACACTTGCAGTTTCCTTTGT
ACAGACTTTGATGACAAGAGTTGCGAGCATGGCTACAAGAATGATGTACTTGCCTTTGTAAATGTTTGCAAAACTTGGAA
TGTACCTTGCTATATCGAACGCTCACGTTCTGGCAATGGTGCTCACGTATGGATTTTCTTTGAAACACCAGTAACTGCTT
TCAAGGCACGCAAGTTGGGAAATGCCATTCTTACAGAGGCGATGAGTTGTGACGCTCACCTGTCTTTCAAGTCATACGAC
CGTTTCTTTCCAAACCAAGACACCTTGCCCGAAGGAGGACTGGGCAATCTTGTAGCCTTGCCATTGCAAGGTATGGCTCG
ACGCAAAGGGAACAGTGTGTTCGTTGATGAAGACTTCAATGCGTATGCCGACCAATGGGAAATGTTGTCGCAAATCCATA
AGCTATCAGAGGTAGAACTTGATTTGTTATTACAGCTGCATGCAGTGCCAACATTAGGAGAACTGTCAAAGACCTGCGAT
GAGAAACCTTGGGAGACTCCTCATATGGATGCTGCGCAATCTGAAGACTATCCAAAACAAATCGTTCTGACAAGAGCGAA
TATGCTTTATGTTCCTTTAGCAAGTCTATCTGCCAAATGTGTGAATGTTTTTAAGCGCATAGCAGCTTTTCGTAATCCGG
AGTTTTATGAGAAGCAAGGTATGCGCCTTTCTACCTATAATATCCCTCGCATCATTTCATGTTCGGAAATGACAGATGAT
TATCTTGTCCTTCCTCGTGGGTGTGAAGATGCTGTTTGTGGTATTCTAACCCAACATGGAGTAAAGGTAGTAATCTCAGA
CAAAACAAATCATGGGCATAATATCAATGTTACATTCAGAGGATCTCTTCGGGAAGAACAGCAAAATGCAATGGAAGCAT
TTGCTGGACATAATATAGGAACTTTATCAGCAACAACAGCGTTTGGAAAGACAGTGTTTGCCATCGGAATGCTTGCAAGG
AGAAAGGTGAACACCTTAATTCTTGTTCATAACAAGGCATTGCTGGAACAATGGAAAGAACGGTTGGAAACTTTCCTCAA
GATAGATGAGACCATCGAAGAGCTAGTAGTCAAACGAGGAAGGAAAAAGAATTCTTCGGTCATTGGTTGTTTATATGCAG
GCAAGAACACATTGCATGGCATCATTGATATAGCTTTGATACAATCTTGTTTGAGCGATGGTGAAGCGAAGCCTTTTGTC
AAGGATTACGGCATGGTGATAGTAGATGAATGTCATCATGTATCCTCTGTCAGCTTCGAGCAAGTGCTTCGACAAGTAAC
AGCTACATACGTATATGGTTTGACAGCAACTCCTGTCAGAAAGGATGGGCATCAACCTATTATTTTCATGCAATGCGGAA
AGATAAGATTCACAGCTGATGCCAAGAGCCAAATGGAAAATCAAACATTTAAACGTTTATTGATTCCAAGGTTTACATCA
TTCCGAAACATTTCGTCAGATAACAAGACTTACGTTCAGGTTACACAAGACTTGTCCGAAGATAAGGTTAGGAATGAGTT
CATCGTAGAAGATGTAAGAATTGCCATTCAAGAAGGTCGTACCCCATTGGTATTAACCACTCGCACTGCTCATGTCAAGG
CGTTGGCACAAATGCTTATTCCATTTGCAGACCATGTCATTCAACTCTTTGGAGCTGATTCTGCTAAAGAAAAGCGTCTT
GCATTACAAAATCTACAGTCAATGCCCACATCAGAATCACTTGTGATTGTGGCTACAGGAAAGTATGTAGGAGAAGGCTT
TGATTATCCTCGCCTTGATACACTGTTCCTTACTATGCCTATAGCTTGGAAAGGAAACGTTGAGCAATATGCAGGGCGTT
TGCATAGGGAATACGCAGGAAAGAAAGAAGTGCGTATTTATGATTATGTGGATGTTCATGTCCCACTTTGTGACTCTATG
TATCGTAAACGGCTAAAAGGGTATTTAAGAGCAGGATACGGAAAGTATGTGACATCATCCACGCTTGACAAAAATCCCCA
AGAACTGATATATGAACGAAACAATTACGAAGCGACATTTCGGAATGATTTGGCAAAAGCCCAGTACTCTGTCATCATCG
CAGTCCCAAAAGTAAAGTTCAAATACAAGCCCGTTATCATGTCAACACTTGCAAGCATTATTCATAATGGTGTTAATGTG
GCTGTACATATCAAAGAGGAAGGAGCTAATGAGATAGAACTTAAAAATACAGGAATGGATGTGGTGTGCAACAAGGAACA
AACTCTGCAATGCGCCATCATAGACAAATCTATTGTCTGGTATGGGAACATAAACTTCTTTGGTTACAATTCGGAAACAA
ACAATGTTATGCGAATCGCTGACCACAAAATAGCCAACGAAATGATAGAAATACTATACTCAGACACTGGAAATGATGTA
AATGGAGGTTAA

Protein sequence :
MDTGKQLNANELIAKLQELEKENARLRKILDVHGIPYIVTEPNVTTKESLHAIFHTDSKLSLQEKVALFRSVFQGRDDVF
AKRWYSSTTQKSGYQPVCTREWNREFCDKRKYKCADCPNRQFAPLAYNDFFNHLAGKDVWGRDVIGLYPIRKDNTCSFLC
TDFDDKSCEHGYKNDVLAFVNVCKTWNVPCYIERSRSGNGAHVWIFFETPVTAFKARKLGNAILTEAMSCDAHLSFKSYD
RFFPNQDTLPEGGLGNLVALPLQGMARRKGNSVFVDEDFNAYADQWEMLSQIHKLSEVELDLLLQLHAVPTLGELSKTCD
EKPWETPHMDAAQSEDYPKQIVLTRANMLYVPLASLSAKCVNVFKRIAAFRNPEFYEKQGMRLSTYNIPRIISCSEMTDD
YLVLPRGCEDAVCGILTQHGVKVVISDKTNHGHNINVTFRGSLREEQQNAMEAFAGHNIGTLSATTAFGKTVFAIGMLAR
RKVNTLILVHNKALLEQWKERLETFLKIDETIEELVVKRGRKKNSSVIGCLYAGKNTLHGIIDIALIQSCLSDGEAKPFV
KDYGMVIVDECHHVSSVSFEQVLRQVTATYVYGLTATPVRKDGHQPIIFMQCGKIRFTADAKSQMENQTFKRLLIPRFTS
FRNISSDNKTYVQVTQDLSEDKVRNEFIVEDVRIAIQEGRTPLVLTTRTAHVKALAQMLIPFADHVIQLFGADSAKEKRL
ALQNLQSMPTSESLVIVATGKYVGEGFDYPRLDTLFLTMPIAWKGNVEQYAGRLHREYAGKKEVRIYDYVDVHVPLCDSM
YRKRLKGYLRAGYGKYVTSSTLDKNPQELIYERNNYEATFRNDLAKAQYSVIIAVPKVKFKYKPVIMSTLASIIHNGVNV
AVHIKEEGANEIELKNTGMDVVCNKEQTLQCAIIDKSIVWYGNINFFGYNSETNNVMRIADHKIANEMIEILYSDTGNDV
NGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1129 NP_286664.1 helicase Not tested TAI Protein 4e-140 41
Z1568 NP_287072.1 helicase Not tested TAI Protein 4e-140 41