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Name : Odosp_0427 (Odosp_0427) Accession : YP_004251698.1 Strain : Odoribacter splanchnicus DSM 220712 Genome accession: NC_015160 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 506334 - 507608 bp Length : 1275 bp Strand : - Note : COGs: COG0172 Seryl-tRNA synthetase; InterPro IPR015866: IPR002314: IPR002317; KEGG: pgi:PG0316 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Seryl-tRNA synthetase, class IIa, N-terminal; PRIAM: Serine--t DNA sequence : ATGTTGAATCTGAAATTTATCCAGGAAAATAAAGAAACCGTCATAGAGCGCCTGGCTGTAAAAAATTTTGATGCCCGTGA ATCCGTTGAAAAAATCATCGCTCTCGACAACCAGCGAAAATCCTTACAACAGGAGGCAGAAGCCAAACAGGCTCAAATGA ATATCATCGCCAAAGAAATCGGTAAACTGATGCAATCGGGACAAAAAGAAGCCGCAGAAAAAGCCCGCCAGGAAACGGCC GATCTGAAATCAGCTATTGCGGGATTGAATAGCCGGCGCACCGAAGTCAGCAACGAATTAACCGACATTTTGCTCCGCCT GCCCAATATGCCCCATGCCTCTGTGGCTAAAGGAAAGTCTGAAGCAGACAATGAGATCGTTAAAATTGTCGACAACATAC CCCAAAAGCATGAAAACGATCTGCCCCATTGGGAACTTGCCAGGAAATATGATTTGATCGATTTCGAAACCGGTGTAAAA ATCACCGGTGCCGGTTTTCCCCTGTATAAAGGCCTGGGAGCACGACTGCAACGGGCATTGATCAATTTCTTCCTGGATGA AAATATCAAAGCCGGTTATCAAGAGGTACAACCACCCCTGATGGTGAATGCCGACTCTGGCTACGGAACCGGACAGTTAC CGGACAAAGACGGTCAGATGTACTATGTCAACGAAGACAATCTCTATCTGATCCCGACTGCCGAAGTTCCGGTAACCAAC ATTTACCGCGACGTCATTCTGGACGGAGACCAGCTACCGGTAAAAAATACCGCTTATTCCGCTTGTTTCCGCCGGGAAGC CGGTTCTTACGGCAAAGATGTAAGAGGATTGAACCGGTTACATCAATTCGATAAAGTTGAAATTGTCCAGATCACCCGTC CCGAAGTATCCTACGAGGCCCTGGAAGGTATGGTGAAACATGTGGAGAGCCTGCTGATCAAGCTAGGCCTTCCCTATCGC ATCGTTCGCTTATGTGGTGGAGATATCAGTTTCACCTCTGCCCTGACTTTCGATTTTGAAGTCTATTCCAAAGCACAGGA AAAATGGTTGGAAGTCAGCTCTGTATCCAATTTCGAGGAATTCCAGGCCAACCGCTTGAAATTACGGTTCAAAGACAAGG GAGATAAGAAAACGACAACCTGCCATACGCTGAACGGAAGTTCACTGGCTCTTCCCCGGATTGTCGCTGCCTTATTGGAA AACTATCAATGCGAAGAAGGTATACGGCTACCGGAGGTGTTGCAGACGTTTATGGGGACAGAGATGATAAGGTAA Protein sequence : MLNLKFIQENKETVIERLAVKNFDARESVEKIIALDNQRKSLQQEAEAKQAQMNIIAKEIGKLMQSGQKEAAEKARQETA DLKSAIAGLNSRRTEVSNELTDILLRLPNMPHASVAKGKSEADNEIVKIVDNIPQKHENDLPHWELARKYDLIDFETGVK ITGAGFPLYKGLGARLQRALINFFLDENIKAGYQEVQPPLMVNADSGYGTGQLPDKDGQMYYVNEDNLYLIPTAEVPVTN IYRDVILDGDQLPVKNTAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVQITRPEVSYEALEGMVKHVESLLIKLGLPYR IVRLCGGDISFTSALTFDFEVYSKAQEKWLEVSSVSNFEEFQANRLKLRFKDKGDKKTTTCHTLNGSSLALPRIVAALLE NYQCEEGIRLPEVLQTFMGTEMIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-74 | 45 |
