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Name : Odosp_3555 (Odosp_3555) Accession : YP_004254686.1 Strain : Odoribacter splanchnicus DSM 220712 Genome accession: NC_015160 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 4228481 - 4229767 bp Length : 1287 bp Strand : + Note : COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterPro IPR001732: IPR014026: IPR014027: IPR017476; KEGG: fjo:Fjoh_0356 UDP-glucose/GDP-mannose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose DNA sequence : ATGGAAGAGATTAAAATCGGAGTCGTCGGATTAGGGTATGTAGGACTTCCTTTAGCCCGTCTCTTTGCGACAAAATATGC TGTAGTCGGGTTCGATCTGAAAAAAGAACGTATCGAAGCCTTGAACCGAGGGATAGACAGGACACTGGAAGTGTCGGAAG AAGTGATGAAATCGGTATTGCGCCCCTCCGTTCCCAAACGGGGAGAGAAGGGGTTGTATTGTTCCTGTGACCCGGAAGAT CTGAGAGATTGCAATTATTATATCATTACCGTGCCCACTCCTGTCGATAAACATAACAGGCCCGATCTCACTCCGTTGAT CAGGGCTAGTGAGACAGTCGGTCAGGTGATTGTTCGCGGAGATATTGTCATTTATGAATCGACGGTTTATCCCGGGGCTA CCGAAGAAGACTGTATCCCTGTGATAGAGCGGGTTTCAGGATTAAAATACAATGTAGATTTCTTTGCCGGTTATTCCCCC GAAAGAATCAATCCGGGAGATAAACAACATACGGTAGAAAAAATTAAAAAGGTAACTTCGGGTTCTACTCCCGGGGTGGC AGAGAAAGTGAACGCGCTCTATCATTCGGTTATCGTGGCGGGCACCCATCTGGCTCCTTCTATCAGAGTGGCCGAGGCAG CCAAGGTAATAGAAAATTCACAGCGGGATATCAATATCGCCTTTGTCAACGAATTGTCGAAAATCTTCAATTTAATGCAT ATCGATACACAAGCTGTGCTCGAAGCTGCCGCTACGAAGTGGAATTTTTTATCCTTCCGGCCCGGCTTGGTCGGAGGACA TTGTATCGGTGTGGATCCCTATTATTTGGCCCAGAAAGCTCAGGAATACGGATACCATCCGGAAATTATTCTGGCAGGAC GCAGACTGAACGACAGTATGGGCGAGTATGTGGCCAAACAAACGTTGAAGTGTATGATCCGGAAAGGACAATGTATCAAG GGATCTAAAGTTTTGGTGCTGGGGATTACTTTTAAAGAAAATTGTCCCGATGTCAGAAATACCAAAGTGGTCGATATTAT CGCTGCTTTGAAAGAATTTGACTTGGAAGTCGATGTTTACGATCCCTGGGCATCTCCCGAGGAAGTACGGAAAGTCTACG GTTTAGAAATGAAGAATACCCTCCCCGCCGAAAAATACGAGGCGGTGGTATTGGCTGTTGCTCATCAGGTATTCCGGTCT TTGCAATTGAGGGAGTTGTGTAAAGAAAACGGTATTGTTTATGATGTGAAAAGTGTTGCCGGAGAGGCTGTAGAAGGACG GTTGTAA Protein sequence : MEEIKIGVVGLGYVGLPLARLFATKYAVVGFDLKKERIEALNRGIDRTLEVSEEVMKSVLRPSVPKRGEKGLYCSCDPED LRDCNYYIITVPTPVDKHNRPDLTPLIRASETVGQVIVRGDIVIYESTVYPGATEEDCIPVIERVSGLKYNVDFFAGYSP ERINPGDKQHTVEKIKKVTSGSTPGVAEKVNALYHSVIVAGTHLAPSIRVAEAAKVIENSQRDINIAFVNELSKIFNLMH IDTQAVLEAAATKWNFLSFRPGLVGGHCIGVDPYYLAQKAQEYGYHPEIILAGRRLNDSMGEYVAKQTLKCMIRKGQCIK GSKVLVLGITFKENCPDVRNTKVVDIIAALKEFDLEVDVYDPWASPEEVRKVYGLEMKNTLPAEKYEAVVLAVAHQVFRS LQLRELCKENGIVYDVKSVAGEAVEGRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-107 | 55 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-107 | 55 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-100 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Odosp_3555 | YP_004254686.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 8e-108 | 55 |
