Gene Information

Name : Odosp_3462 (Odosp_3462)
Accession : YP_004254593.1
Strain : Odoribacter splanchnicus DSM 220712
Genome accession: NC_015160
Putative virulence/resistance : Unknown
Product : Integrase catalytic region
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 4130289 - 4131071 bp
Length : 783 bp
Strand : -
Note : COGs: COG2801 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: bca:BCE_A0056 IS3 family transposase OrfB; PFAM: Integrase, catalytic core; SPTR: Integrase catalytic region; PFAM: Integrase core domain

DNA sequence :
ATGGCTCGTTCCGTGTTCTATTATCATCTTAAGCGGTTGAGAGCCGCGGATAAATATGTTAATGAAAAAGATAATATCAA
AGCTATTTTCCATGAACATAAAGGGCGTTATGGCTATAGGCGCATTACCGCCGAGATGCGGAACCGTGGTTTTATAATCA
ACCATAAGACTGTTCAAAGACTAAGGCAGTCCATGAATATCAAAAGTCAGATACGCAAAGTGCGTTATCGTTCATACAAA
GGCGAAGTCGGTAGAATCGCTCCCAATATCATTAACCGTGATTTTGCTGCATCGGCACCCAATCAGAAATGGGCGACCGA
TGTGACACAGATAAACATTGGTTCGACTAAGTTGTATCTGTCTCCAATCCTCGATATGTTCAATGGCGAAATCGTATCTT
ACAACATCTCTAAATCGCCAAACCTTGAGCAGATATATGATATGCTTGACAAAGCTTTTGAAAAATACGATAATCTTGAC
GGGCTTATAATACATTCTGATCAAGGATGGCAATATCAACACTTCGGATACAGACAGCGTCTTGAGGATTACAATATAAT
CCAAAGTATGTCCCGAAAAGGCAATTGTCTTGACAATGCCATGGCTGAAAACTTCTTCGGCATAATGAAATCCGAATTGC
TTTATGCCGAGAAATTTGAGTCGCCGGAAGCCTTTATAAAGGCTTTGAATGAATATATTGATTATTACAACAATAAAAGA
ATCAAATCCCGGTTAAATGGAAAGAGTCCGGTACAATACCGAACTCTTTCTATAACTGGATAA

Protein sequence :
MARSVFYYHLKRLRAADKYVNEKDNIKAIFHEHKGRYGYRRITAEMRNRGFIINHKTVQRLRQSMNIKSQIRKVRYRSYK
GEVGRIAPNIINRDFAASAPNQKWATDVTQINIGSTKLYLSPILDMFNGEIVSYNISKSPNLEQIYDMLDKAFEKYDNLD
GLIIHSDQGWQYQHFGYRQRLEDYNIIQSMSRKGNCLDNAMAENFFGIMKSELLYAEKFESPEAFIKALNEYIDYYNNKR
IKSRLNGKSPVQYRTLSITG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 3e-68 56
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 8e-62 54
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 7e-62 54
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 1e-65 50
CDBH8_0905 YP_005159997.1 transposase-like protein Not tested Not named Protein 3e-51 43
CDCE8392_1982 YP_005134513.1 transposase-like protein Not tested Not named Protein 2e-52 43