Gene Information

Name : Odosp_2993 (Odosp_2993)
Accession : YP_004254141.1
Strain : Odoribacter splanchnicus DSM 220712
Genome accession: NC_015160
Putative virulence/resistance : Virulence
Product : Resolvase domain
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 3559653 - 3560171 bp
Length : 519 bp
Strand : -
Note : COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119; KEGG: bfs:pBF9343.01 resolvase/DNA invertase; PFAM: Resolvase, N-terminal; SPTR: DNA-invertase hin; PFAM: Resolvase, N terminal domain

DNA sequence :
ATGACGATTATTAACAAAGAGTTCCAGGGAAGGATCATCGGTTACGCCAGGGTGAGTACGCGTGACCAGAATCTGGATAT
GCAATTGGATGTGTTACAGCGTCAGGATTGCGTACAAATATTTTGCGAGAAAATTTCCGGGGTAAAAAAACGTCCGGAAC
TGGAACATTGCCTTTCACTATTACGTGAAGGTGATGTATTAGTTGTTTATAAATTAGATCGTTTGGCCCGTAGCCTGTCT
GAAATTGTCCGGATATGTTCGGAGCTGGAAAGTAAAAACATACGGATTCGTTCGGTCAAGGATAATATTGATACGACCGA
TTATATGGGGAAATTTACGATGCATATTTTTGCGGCTCTGGCAGAATTCGAACGGAATGTGATTATGGAAAGGACTCGTG
AAGGACGGGAAGCAGCCCGGAAAAGAGGAAAAAAATTCGGAAGACCTCAGGGCTTGAATCCGGAAACCCAGCAAAAAGTA
AAAAAGCAGCTCTCTTGTATCAAAAAGGATTTGCTGTAA

Protein sequence :
MTIINKEFQGRIIGYARVSTRDQNLDMQLDVLQRQDCVQIFCEKISGVKKRPELEHCLSLLREGDVLVVYKLDRLARSLS
EIVRICSELESKNIRIRSVKDNIDTTDYMGKFTMHIFAALAEFERNVIMERTREGREAARKRGKKFGRPQGLNPETQQKV
KKQLSCIKKDLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
resX ADZ05759.1 invertase/resolvase Not tested AbaR10 Protein 3e-24 49
res AGF35059.1 resolvase Not tested SGI1 Protein 1e-27 49
res AGK06929.1 resolvase Not tested SGI1 Protein 1e-27 49
res AGK06966.1 resolvase Not tested SGI1 Protein 1e-27 49
res AGK07012.1 resolvase Not tested SGI1 Protein 1e-27 49
res AGK07070.1 resolvase Not tested SGI1 Protein 1e-27 49
res AAK02044.1 resolvase Not tested SGI1 Protein 1e-27 49
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 1e-27 49
res AGF34985.1 resolvase Not tested SGI1 Protein 1e-27 49
res AGF35025.1 resolvase Not tested SGI1 Protein 1e-27 49
1_365 CAJ77091.1 Resolvase N-term Not tested AbaR1 Protein 2e-24 49
resX ACN81037.1 partial invertase/resolvase Not tested AbaR5 Protein 3e-24 49
resX ADZ05753.1 invertase/resolvase Not tested AbaR10 Protein 2e-24 49
resX ADZ05809.1 invertase/resolvase Not tested AbaR20 Protein 2e-24 49
resX AGK36651.1 partial invertase/resolvase Not tested AbaR26 Protein 2e-24 49
ACICU_00231 YP_001844890.1 site-specific recombinase, DNA invertase Pin protein Not tested AbaR20 Protein 3e-24 49
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 2e-25 46
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 1e-25 46
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 8e-26 46
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 8e-26 46
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 5e-17 41
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 5e-17 41
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 7e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Odosp_2993 YP_004254141.1 Resolvase domain VFG1030 Protein 2e-17 41