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Name : Odosp_0220 (Odosp_0220) Accession : YP_004251505.1 Strain : Odoribacter splanchnicus DSM 220712 Genome accession: NC_015160 Putative virulence/resistance : Unknown Product : RNA-directed DNA polymerase (Reverse transcriptase) Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3344 EC number : - Position : 257567 - 259375 bp Length : 1809 bp Strand : - Note : COGs: COG3344 Retron-type reverse transcriptase; InterPro IPR000477: IPR000442; KEGG: bth:BT_2602 maturase/reverse transcriptase; PFAM: RNA-directed DNA polymerase (reverse transcriptase); Intron maturase, type II; SPTR: uncharacterized protein; PFAM: Rev DNA sequence : ATGAGAAATCCAGAGCAAGTATTAAACATTTTAGCTGGACACAGCAACGAGCCTGAGTATAAATACGAAAGGCTCTACCG TATTCTATTCAATGAACAGATGTTCTTTGCCGCCTACCAACGTATGTATGCAAAGCCGGGAAACATGACACCCGGCACTG ATGGCAAAACAGAGGATGAAATGAGCATTGATAGGATAAACAAACTCATAGAGAGTATAAAGGATGAGACTTATAGTCCC AATCCTGCAAAGAGAATTTACATTCCGAAAAAGAATGGGAAGATGCGTCCGTTAGGAATACCGTCTTTTGAAGACAAATT GGTTCAAGAGGCAGTAAGAATGGTGCTTGAAGCTATATATGAGGGACACTTTGAGTGGACATCGCACGGCTTCAGACCAA ACAGAAGCTGCCACACAGCACTGAAAAGTCTACAAAATAATTTCAACGGTGCAAAATGGTTCATCGAGGGAGATATAAAA GGCTTCTTTGACAACATAGACCATGATGTGCTGATAGAAATAATGAAAGGCAGAATAGCAGATGACAGATTTCTTCGTCT GATACGGAAATTCCTCAATGCAGGGTACATGGAAGAGTGGCAATTCAACAAGACTTATTCAGGGACACCGCAAGGTGGTA TCATAAGCCCTGTTTTGGCAAATATATACCTTGACAAGTTCGATAAGTACATGAATGAATATGCCAACAAATTCAATAAA GGGACAGTAAGAAGCCGCAACAAGGATATTTGCAAACTCAACAGCAGAGTACACTACCTAAAACGTAGGATAAATGAAGT AGAGGATGTAAACGTAAGAACAAGGATGGTAGAAGAACTGCACGAAAAGCAGAAGCGGATACTAACAATGCCAAGTGGCA ACGATATGGACAGAAATTTTCGCAGACTGAGATATCTGCGCTACGCCGATGATTTTCTAATCGGGGTTATCGGAACGAAA AACGAATGTGAGACAATCAAAGCTGACATCACCAAGTTTATGCAGGAAAAGTTAAGGCTGGAGATGTCACAGGAAAAGAC TTTGATTACAAATGCACAAGACAGCGCAAAATTTTTGGGTTACGAAATATATGTCCGTAAAGACTATGCCACAAAGAGAA ACAGTAACGGAACAGTGCGCAGATACTTCAACGGGAACGTGATATTGCACGTTTCAAGAGAAGTAATCAAGAATAAACTG CTCAGCCTCGAAGCCATGAAAGTTGTCACCAAACGCGGCAAGGAAACATGGGTGTCAAAAGGCAGGACTTATATGATTGA CAATGAAGCGCACGAGATTGTATCTCAGTTTAATACCGAAATACGAGGGTTCTACAACTATTACTCAATAGCAAACAATG CATCGGCTTTGGGACGCTCTTTCGGCTGTATTATGAAGTTCTCCATGTACAAAACTCTTGCTCAAAAGCTGAATATGTCA GTGAGAAAAGTCATTGAAACATACCGCAAGGACAATCTCTTTGCCGTGCCTTTTGTAAACAAGGGAGGAGAAACCAAGTA CAGGGTATTCTACAATGAGGGTTACGCCCGTAAAACGGATTGTGAAACAGCCCCAAGTGACAATCTGCCGTATATGTTCA AAACACCATCGTTAAGTTTGATAGAAAGGCTTACAACAAAAACGTGCGAACTATGTGGCAAGCACGGAGAAGTGGTAATG CACCATGTCCGCACTCTCAAAGAGTTAAAAGGTAAAAATGACTGGGAACGCAAAATGCTCTATATGCACAGAAAGACTTT GGTCGTATGTGCGGAGTGTAACGCAAAAATCCAGAGCTGTGATAAGTAA Protein sequence : MRNPEQVLNILAGHSNEPEYKYERLYRILFNEQMFFAAYQRMYAKPGNMTPGTDGKTEDEMSIDRINKLIESIKDETYSP NPAKRIYIPKKNGKMRPLGIPSFEDKLVQEAVRMVLEAIYEGHFEWTSHGFRPNRSCHTALKSLQNNFNGAKWFIEGDIK GFFDNIDHDVLIEIMKGRIADDRFLRLIRKFLNAGYMEEWQFNKTYSGTPQGGIISPVLANIYLDKFDKYMNEYANKFNK GTVRSRNKDICKLNSRVHYLKRRINEVEDVNVRTRMVEELHEKQKRILTMPSGNDMDRNFRRLRYLRYADDFLIGVIGTK NECETIKADITKFMQEKLRLEMSQEKTLITNAQDSAKFLGYEIYVRKDYATKRNSNGTVRRYFNGNVILHVSREVIKNKL LSLEAMKVVTKRGKETWVSKGRTYMIDNEAHEIVSQFNTEIRGFYNYYSIANNASALGRSFGCIMKFSMYKTLAQKLNMS VRKVIETYRKDNLFAVPFVNKGGETKYRVFYNEGYARKTDCETAPSDNLPYMFKTPSLSLIERLTTKTCELCGKHGEVVM HHVRTLKELKGKNDWERKMLYMHRKTLVVCAECNAKIQSCDK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EFAU085_00689 | YP_008394213.1 | HNH endonuclease domain protein | Not tested | Not named | Protein | 1e-123 | 45 |
