Gene Information

Name : Odosp_2085 (Odosp_2085)
Accession : YP_004253269.1
Strain : Odoribacter splanchnicus DSM 220712
Genome accession: NC_015160
Putative virulence/resistance : Unknown
Product : Integrase catalytic region
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 2486481 - 2487431 bp
Length : 951 bp
Strand : +
Note : COGs: COG2826 Transposase and inactivated derivatives IS30 family; InterPro IPR001584; KEGG: bfs:BF2150 IS element; PFAM: Integrase, catalytic core; SPTR: uncharacterized protein; PFAM: Integrase core domain

DNA sequence :
ATGTATAAACAACTGTCCCGCGAGCAAAGATACGCAATCTATCTGGGAATTCAAGAAGGCAAAAGCCAGAAAGCCATTGC
TCGGCAAAACAACATCCATCCCTCCACCGTCAGTCGCGAGGTGAGGCGCAACAGCACGAAGCGCGGCGAGTATCAATGGC
AACACGCGCAGAAGTTATCTGATGAGCGTCGTGAACGTCTTCCCGGCAACCATGCCGTCCGTCCCGATGTGATGCAGGAA
GCCTTACGGCTTCTGGTAAGCGAGGATTGGTCACCCAAACAGATATCCGGGTGGCTGTCGCACAAAGGCATGACCGTCTC
CCATGAAACGATTTACCGCCGCATCCGGGCGGATGTGAGCGGAGAACTGGTATCCCACTGCCGTCACAGGATGAAATACA
GGCATCATGTAAAGCGCCCCCGCACAACCAAGGTGCGCAACATACCGCAACGCATCAGCATCCATGAGCGTCCGGAAGAA
GCTGACGGAAAAAGGTTCGGGGACTGGGAGATGGACTTGATTGTTGGCAAGGGGCAAAAGGGCGCCATACTTACTTTATG
CGAGCGGAGCGTAAACTACATGATGATGGGGAGGCTGCCGCAAGGAAAGAAGCCGGAGGCGGTTGCAGAGGCAGTGATAA
GGATGCTGATGCCGTTTAAAGAACACGTCCTCACGATAACCACTGACAACGGTGGGGAATTCCGCTGCCATAGAAAGATT
GCAGAAAGGCTCGCGACCACTGTCTACTTTGCCGATTCATACGCTTCCTGGCAGAAAGGTGCCATTGAGAAGACAAACAA
ACTTATCAGACAATATATCCCAAAAGGAACTGATTTCAGACTGCTTACGGATGAATTCATCAGGAATGTACAATATAAGA
TTAATAGAAGACCAAGGGAAAAATTGAATTTTTATACACCAAAGGAGTGTTTTTTCAAACTTTTTGCATAA

Protein sequence :
MYKQLSREQRYAIYLGIQEGKSQKAIARQNNIHPSTVSREVRRNSTKRGEYQWQHAQKLSDERRERLPGNHAVRPDVMQE
ALRLLVSEDWSPKQISGWLSHKGMTVSHETIYRRIRADVSGELVSHCRHRMKYRHHVKRPRTTKVRNIPQRISIHERPEE
ADGKRFGDWEMDLIVGKGQKGAILTLCERSVNYMMMGRLPQGKKPEAVAEAVIRMLMPFKEHVLTITTDNGGEFRCHRKI
AERLATTVYFADSYASWQKGAIEKTNKLIRQYIPKGTDFRLLTDEFIRNVQYKINRRPREKLNFYTPKECFFKLFA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB1770 NP_274770.1 IS30 family transposase Not tested IHT-C Protein 2e-40 41