Gene Information

Name : Odosp_1957 (Odosp_1957)
Accession : YP_004253144.1
Strain : Odoribacter splanchnicus DSM 220712
Genome accession: NC_015160
Putative virulence/resistance : Unknown
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 2340172 - 2342271 bp
Length : 2100 bp
Strand : +
Note : COGs: COG1200 RecG-like helicase; InterProIPR014001: IPR001650: IPR004609: IPR004365: IPR 011545; KEGG: pdi:BDI_2699 ATP-dependent DNA helicase RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type

DNA sequence :
ATGGAACTTGCAGGATTGAATATCAAATTTCTACCCGGTGTCGGTGAAAAGAAAGCTGCCGTGCTCTATGAGGAACTTCA
GGTGCAGAGTTATGAGGATATGCTCTACCATGTCCCTTTCAAATACATCGACCGGAGTAAAATCTATTCCATCGCAGAAT
TGAACGGACGTCTGCCTTATATTCAGATCAAGGCTAAAATCCGTAATCTGAAAACCATCGGTGAAGGCAAAGCCTTGCGT
ATGACTGCAACGGCTTATGACGAGACAGGAACCCTGGAATTAGTCTGGTTCAAAGGATTTAAATTCCTGACCAACCAAAT
CGAACCCGACAAAGAATACCTGATTTTCGGACAACCTTCCGAATTCAACCACAAGCTGAATATTGTACATCCTGAAATCG
ACAGCTTTGAAAAAGCTTCCCAACTGTTGGTCGGTTTTCAAGCCGTCTATCCGACCACCGAAAAGATGAAAAAGGCTTTC
CTAAACTCCAAAGCGATCAGCAAAATTCAGGATTCCATTTTTAAAACCATCAAAGGGAAAATCTCAGAGACCCTGCCAGC
CTGGTTTATTCAGCAACACAAACTCATGTATCTGCATGAGGCTCTCTATAATATCCATTTCCCGGAAAATCCGGACATGC
TGCGTAAAGCTTTATTCCGACTGAAATTTGAGGAACTATTTTACATCCAGCTGAATATCCTGAAACTCAAATACAAACGC
AAAACTTATTTTAAAGGTCATGAGTTCAAAACGATCGGTGAATATTTCAACACATTCTATCATCGATACCTACCTTTCGA
ACTGACCGATGCACAAAAACGGGTGATTAAAGAAATCCGTCAGGATTGCGGCAGTGGGAAACAGATGAACCGGCTGTTGC
AGGGAGATGTAGGCAGCGGTAAAACCCTGGTGGCTGTGATGTGTATGCTGATGGCGCTGGACAATTGTTGCCAGACCTGT
CTGATGGCTCCCACCGAGATTCTGGCCACCCAACATTATGAAACGATCCAGGGCATGCTGGGAGAAATGGGGATCACCGT
AGCTTTACTCACAGGATCGACTAAAAAACGCGAGCGGGAAGAAATTCACCGGGGCTTACAGGACGGTAGCCTGCAAATTC
TGATCGGTACCCATGCTTTGCTCGAAGATGTGGTGTCTTTTCAGAATATCGGCCTGGTAATCATCGACGAGCAACACCGT
TTCGGTGTAGCCCAACGTGCCAAACTCTGGCAAAAAAATACCATTCCTCCCCACGTACTGGTGATGACAGCCACCCCTAT
TCCCCGTACATTAGCTATGACTTTATATGGTGACCTCGATGTGTCGGTAATCGACGAACTTCCTCCGGGACGTAAACCCA
TTACTACTTTTCATGCTTTCGATAAAAAACGATTGGAAGTATTTCAGTTTATTGAAAAAGAACTGCTCAAAGGACGGCAG
GCTTATGTGGTATATCCCTTGATCTATGAGTCGGAAAAAATGGATTTCCGGAATTTGGAAGAAGGCTACGAACAAATCAA
CAATTACTTCCTTCCCAAAGGATATAAAGTAGGCATGGTTCACGGTAAACTCAAACCGGCTGAAAAAGATTCGGAAATGC
GCCGTTTTGTCACCGCAGAAACCAAAATACTGGTATCGACGACAGTCATCGAAGTGGGGGTAAACGTTCCCAATGCTTCT
ATTATGGTCATTGAAAGTGCCGAACGTTTCGGATTGTCACAGCTCCATCAGTTACGGGGACGGGTAGGCCGCGGCGCTGA
CCAATCGTATTGTATTCTAATGACTTCCTATAAGATTTCCAACGACTCCCGGAAACGCATCGATACCATGACCGCTACCA
ACGACGGTTTTGAAATCGCCGAAGCCGACCTGAAATTGCGTGGTCCCGGAGATATCGAAGGAACCCAACAAAGTGGCCTC
ACCTGCAGTCTAAAGGTGGCTAATCTGGGTAAAGACACCTTGATCCTCAACGAAGCAACCCGAATCGCCAACGGCATCCT
GTCCGAAGATGCCGATTTGATCAAGGAAGAAAACCAACTCTTCGCCATCCAAATCAAACGCCTGTTCAAAACCCGCATTA
CCTGGAGGTATATTTCCTAG

Protein sequence :
MELAGLNIKFLPGVGEKKAAVLYEELQVQSYEDMLYHVPFKYIDRSKIYSIAELNGRLPYIQIKAKIRNLKTIGEGKALR
MTATAYDETGTLELVWFKGFKFLTNQIEPDKEYLIFGQPSEFNHKLNIVHPEIDSFEKASQLLVGFQAVYPTTEKMKKAF
LNSKAISKIQDSIFKTIKGKISETLPAWFIQQHKLMYLHEALYNIHFPENPDMLRKALFRLKFEELFYIQLNILKLKYKR
KTYFKGHEFKTIGEYFNTFYHRYLPFELTDAQKRVIKEIRQDCGSGKQMNRLLQGDVGSGKTLVAVMCMLMALDNCCQTC
LMAPTEILATQHYETIQGMLGEMGITVALLTGSTKKREREEIHRGLQDGSLQILIGTHALLEDVVSFQNIGLVIIDEQHR
FGVAQRAKLWQKNTIPPHVLVMTATPIPRTLAMTLYGDLDVSVIDELPPGRKPITTFHAFDKKRLEVFQFIEKELLKGRQ
AYVVYPLIYESEKMDFRNLEEGYEQINNYFLPKGYKVGMVHGKLKPAEKDSEMRRFVTAETKILVSTTVIEVGVNVPNAS
IMVIESAERFGLSQLHQLRGRVGRGADQSYCILMTSYKISNDSRKRIDTMTATNDGFEIAEADLKLRGPGDIEGTQQSGL
TCSLKVANLGKDTLILNEATRIANGILSEDADLIKEENQLFAIQIKRLFKTRITWRYIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 2e-89 41