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Name : Odosp_1370 (Odosp_1370) Accession : YP_004252590.1 Strain : Odoribacter splanchnicus DSM 220712 Genome accession: NC_015160 Putative virulence/resistance : Resistance Product : Xenobiotic-transporting ATPase Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : 3.6.3.44 Position : 1620656 - 1622455 bp Length : 1800 bp Strand : + Note : COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR001140: IPR003439: IPR003593; KEGG: emi:Emin_0879 ABC transporter related; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-t DNA sequence : ATGGATACAAATAAACGCAAGACCGGGCTGGCACGGTTGATAGAAATAGCCGGCACTAAACGTCGGCTGCTCATCGGGGC GATGTTGTTGGCAGTTATCACCGCCATCGTGCAGTTTGTGCCGATCATAGCGGTGTACAATATTCTCATCGAGTTGGCAG AGCATGCGCTTGATCCCTCATTGATTGACAAGGCATACATCTGGCTGTGGAGCTATATCGCCTTGGGAGCTTTCTTCGCT TTCGGAGTGCTCACGTTTGCTTCCCTCATGCTCTCGCACATTGCCGCTTTCAACATTCTGTATGAAATACGAATGCAGCT AGTACAAAAAATGGTTCGTTTGCCCTTGGGGTTCTTTTCCCGCCGGGCTTCGGGAGAACTGAAGAAAATAATGAGCGACG ACGTGGAGCGCATCGAACTGTTTATTGCCCACCATATCCCTGACATCGTAACTGCCCTACTTTTTCCGCTGATTCTCGTC AGCTATATGTTTGCCGTAGACTGGCGGTTGGCTATCGTAGTATTGGCTGTGCTGGCGATGGCATTCTATGTGATGGGAAG AATGTACACCGGCAAAAAAATCCGGGAGGTTTCCAAACGGTATGTGGAGACCTTAGGCAGAATGAATGCTAGTATTGTGG AATATATTCGCGGTATTCAGGTGGTGAAGACCTTCACCGAATCGACTAATGCCTATCGCAAACTCAATGACGACATCAAG GAGTACCGCAAATTTGCCAACGAGGTAAACGTACAATACCAACCCACATATGTAGGTTTCCTTACCATACTCTCTTCGGC ACTGCTCTTCATCATTCCCGTGGCAGTGTGGCTGCTTGTGGGGAGTGCCTCGTATGCCACTTTCGTGCCGGTGTTACTCA TGTTCCTGTTTTTCGGCGTGGCTGTTTTCTTTCCCGTGCTTAAACTCTTGTGGATAGGCAGCTTTCTGAATCAGAACAAC ATGGGTGTACAGAAGATTGATGACATTCTCTATATGGACGAAATCGAAGAGCCTGACATTCCCCGACACCCCAAAGACGC TTCAGTGGAATTTCGCAACGTCTCTTTTGCCTACGACACCACGCCGATACTCAAAGCGATATCTTTCATCTCCCATCCCG GTATGATAACTGCATTAGTCGGTCCTTCGGGAGCCGGTAAAAGTACCGTTGCTATGCTTGCCGCCCGCTTTTGGGACGTT CAAAGCGGAGAAATCTTAATAGGAGGAGTGCCAGTCAAAGAGATTCCCACTTCGGTGTTGATGGACAACGTCGCTTTTGT CTTTCAGGATAATATGCTCTTCTTCGATACCATCGAGGAGAATATCCGTATGGGTAACAAGACTGCAACCTTTGAGGAAG TGGCACGGGCTGCCTGTGCCGCTCAATGCCATGAGTTTATAGAATCCTTGCCCAATGGTTATCAGACATTGGTAGGCGAA GGAGGCATCTACCTCTCTGGTGGTGAAGCACAACGCATAGCCTTGGCTCGCGCCATATTAAAAGACTCCCCTATTATCTT GCTGGACGAAGCCACCGCCTTTGCCGACCCCGAAAACGAAGGTAAGATTCTGGCAGCATTCTCTCATCTCATCAAAGGAA AGACGGTATTGGTCATCGCTCACCGATTGTCTACAATCACCAATGCCGACCGAATTCTGTATGTAGATAAGGGTGTGATA GCCGAGCAGGGAACACATGAGCAGCTACTTGCTCTTAAAGGAGAATACGCTCGTATGTGGGAAACCTACAACCGAGCAAA GAGGTGGACGATTGGTGGAAAAAATAACCGTAAATTATAA Protein sequence : MDTNKRKTGLARLIEIAGTKRRLLIGAMLLAVITAIVQFVPIIAVYNILIELAEHALDPSLIDKAYIWLWSYIALGAFFA FGVLTFASLMLSHIAAFNILYEIRMQLVQKMVRLPLGFFSRRASGELKKIMSDDVERIELFIAHHIPDIVTALLFPLILV SYMFAVDWRLAIVVLAVLAMAFYVMGRMYTGKKIREVSKRYVETLGRMNASIVEYIRGIQVVKTFTESTNAYRKLNDDIK EYRKFANEVNVQYQPTYVGFLTILSSALLFIIPVAVWLLVGSASYATFVPVLLMFLFFGVAVFFPVLKLLWIGSFLNQNN MGVQKIDDILYMDEIEEPDIPRHPKDASVEFRNVSFAYDTTPILKAISFISHPGMITALVGPSGAGKSTVAMLAARFWDV QSGEILIGGVPVKEIPTSVLMDNVAFVFQDNMLFFDTIEENIRMGNKTATFEEVARAACAAQCHEFIESLPNGYQTLVGE GGIYLSGGEAQRIALARAILKDSPIILLDEATAFADPENEGKILAAFSHLIKGKTVLVIAHRLSTITNADRILYVDKGVI AEQGTHEQLLALKGEYARMWETYNRAKRWTIGGKNNRKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1698 | YP_003446800.1 | multidrug ABC transporter ATPase/permease | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-102 | 42 |
