|
Name : SpiBuddy_0908 (SpiBuddy_0908) Accession : YP_004246929.1 Strain : Sphaerochaeta globosa Buddy Genome accession: NC_015152 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : 5.3.1.5 Position : 972057 - 973385 bp Length : 1329 bp Strand : + Note : PFAM: Xylose isomerase, TIM barrel domain; TIGRFAM: Xylose isomerase, bacterial type; HAMAP: Xylose isomerase; KEGG: ssm:Spirs_3786 xylose isomerase DNA sequence : ATGCAGTATTTTGTTGGACAAGAAGAGTATTTCAAAGGAATCGGTAAAATTCAGTTCGAAGGAAAGGGGAGCAAGAACCC TTTGGCTTTCAGATATTATGATGCTAAGAAGGTAATTGCCGGCAAGACCATGGAAGAACATCTTCGTTTTGCCACCGCCT ACTGGCATAGCTTCTGCGCTGATGGCACCGACCCGTTCGGCAACTCCACCATCGACTTTCCCTTCCGCAAGGCGGATAAA TATGAGAATGCTGTAGCCAAGGCTGATGCTGCATTCGAATTCTTTACCAAGCTCGGTACTCCGTTCTATTGCTTCCATGA CATCGATGCTTCTCCCGATCATGAAGTGGCAGCCGAGTACGAGAAGACCTATCATAAAATTGCCGATGAGCTGCTTGCCC GCCAGAAGGCCAGTGGCATCAAGCTTTTGTGGAATACCGCCAATGTGTTTTCACACCCCAACTACATGAATGGTGCGGCT ACCAATCCTGATTTCAAGGTGGTTTCACGCGCTGCTGTACAGGTTAAGAACAGCCTTGACGTGAACGTCAAGCTCGGTGG TTCCAACTATGTTTTCTGGGGAGGCCGTGAGGGCTATATGAGCCTGCTCAATACGGATATGAAGCGCGAGCAGGAGCACC TTGCACGCTTCTTGACGATGGCCAGGGATTATGGACGCAGCATCGGTTTCAAGGGTACCTTCCTGATCGAACCCAAGCCG ATGGAACCGACCAAGCACCAATATGACTACGATGCGGCAACCACCATCGGTTTCTTGAAGAACTGGGGCTTGGAGAAGGA TTTCAAGTGCAATATTGAAGCTAACCATGCAACACTGGCCGGTCATACGTTCAGCCATGATTTGCAGGTCTGCGCCGACA ATGGCATGCTCGGCAGCGTTGATGCCAACCAGGGCGACTCGATTAATGGTTGGGACACCGATGAGTTCCCCAGCAATGTG TATGAAACCACGCAGGCAATGTTGGTCATTCTCAGAAACGGTGGACTTGGCAACGGCGGTCTTAACTTCGATGCCAAGAG ACGGCGCAACTCCACCGACCTTGAGGATTTGTTCATCGCCCACATCGGTGGCATGGATAGTTTTGCTCTTGGTCTTGAGG TAGCCCAGAAAATTTTGGACGACGGCGTAATCGATTCCTTTGTGAAGGAACGCTATAGCTCCTTCGATAAGGGAGACGGC AAGAAGTTTGAGGAAGGCAAGCTTAGTCTGGCAGAACTCGCAGAGCTTGGACGCAATGCCAAGATTGAGAAGAAGAGCGG TAAGCAGGAGTATCTGAACAACCTGTTGAATTCCTACCTCTTCGGCTAA Protein sequence : MQYFVGQEEYFKGIGKIQFEGKGSKNPLAFRYYDAKKVIAGKTMEEHLRFATAYWHSFCADGTDPFGNSTIDFPFRKADK YENAVAKADAAFEFFTKLGTPFYCFHDIDASPDHEVAAEYEKTYHKIADELLARQKASGIKLLWNTANVFSHPNYMNGAA TNPDFKVVSRAAVQVKNSLDVNVKLGGSNYVFWGGREGYMSLLNTDMKREQEHLARFLTMARDYGRSIGFKGTFLIEPKP MEPTKHQYDYDAATTIGFLKNWGLEKDFKCNIEANHATLAGHTFSHDLQVCADNGMLGSVDANQGDSINGWDTDEFPSNV YETTQAMLVILRNGGLGNGGLNFDAKRRRNSTDLEDLFIAHIGGMDSFALGLEVAQKILDDGVIDSFVKERYSSFDKGDG KKFEEGKLSLAELAELGRNAKIEKKSGKQEYLNNLLNSYLFG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 1e-93 | 54 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 9e-94 | 54 |
