Gene Information

Name : SpiBuddy_2758 (SpiBuddy_2758)
Accession : YP_004248761.1
Strain : Sphaerochaeta globosa Buddy
Genome accession: NC_015152
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 2993519 - 2994952 bp
Length : 1434 bp
Strand : -
Note : TIGRFAM: pyruvate kinase; KEGG: hor:Hore_03220 pyruvate kinase; PFAM: pyruvate kinase, barrel; pyruvate kinase, C-terminal-like

DNA sequence :
ATGAACTATACCAAAATTGTTGCCACACTCGGACCGGCTAGTGAATCCTATGAAATGATACAGTCCATCCTTGAAGCGGG
GTGCAGGGTTATCAGGCTGAACTTCAGCCATGGTTCGCACCAGGAACAGCAAAAGCGCTACGATACTGTGCGCAAGGCAA
GCGAAAAACTGGGGTTTCCCGTAACCATCCTGATGGACCTGCAGGGTCCGAAAATCAGGCTCGGCCAACTCGAAGCGAGC
TCCTATACACTTAAGAAAGGGGAGAAGCTCATTATCACCACCCAACCGTGTGTGGGAAACCGAAGTCGTATCAGCATCGA
CTATCCGAACCTCCACGAGGAAATCCTCATCGGTCAGCGCATTCTCATCAACGATGGCCTCGTAAGTTTGGTGGTTGAGC
AAGTACAAGGTCAGGACATCCATTGCAGGATGCAAGAAGAAGGGACTTTGTTCCCCAGAAAAGGGGTGAACCTGCCCCAG
GTACCGCTGAAGCATCTCAGCTCCTTCACCAAGAAGGATGAAGCGGACTTGGCTTTCGCCTTTGCCAACAACCTTGATTA
CGTTGCCCTCTCCTTTGTTCGCAGCGGCGATGATGTCCGCGCCCTGAAGGCTCATATGCTTCAACACTACGGAAGGATGA
TTCCGGTCATCAGCAAGATTGAGAAGCCCGAGGCGGTGGAAAACCTGAACGATATCATCAGGGAGTCCAGTGTCATCATG
ATCGCCCGAGGGGATTTGGGGGTGGAGGTTCCTGCTGAGGAGGTTCCCCTGATTCAGAAGTCCATCATCCGCAGTTGCAT
AGACAGTGGTACTCCGGTGATTACCGCAACGCAGATGCTGGAGTCGATGATGCACAATCCCCGTCCCACCCGTGCAGAGA
CGAACGACGTTGCCAATGCGGTCCTTGACGGTACCAGTGCGGTCATGCTCAGCGGTGAAACAGCGGCAGGAGAGTATCCA
CTACAGGCTGTAACCACCATGGCACGCATAGCGAGCCTGGTTGAACGCAGCGCGGCCTTCCGCCGTCAGGTATTCAATCA
GATCAGCACCCTCGACCCACAGCGCAAGCAATCCAAAACCGAGGCCGTGGGACTGGCCACACGCGAGCTCGCCCTCTCCA
TCGGCGCCTCCTATATTGCTTGCTTCACCCAATCGGGATCGACTGCCCGCTTGATTGCCAAATTCCGTCCTTCGGTACCC
ATCATTGCATTCTCCCCGTTGAAAGAGGTAGTACAGTACCTTGCCCTCTCGTGGGGTGTCACACCCATACTCATTGAACC
GCAGGACTCGGTCGATCAGTTGCTTGCCTATGCTCCTTGGTATCTGAAGGAACATGGTTTGGTAGAGAAGGGACAGTCGG
TGGTCATAACAGCAGGAGTGCCGGTTGGCAGCTCGGGCAAGACCAATATGATCAAGGTGGTGGAGATAGAGTAG

Protein sequence :
MNYTKIVATLGPASESYEMIQSILEAGCRVIRLNFSHGSHQEQQKRYDTVRKASEKLGFPVTILMDLQGPKIRLGQLEAS
SYTLKKGEKLIITTQPCVGNRSRISIDYPNLHEEILIGQRILINDGLVSLVVEQVQGQDIHCRMQEEGTLFPRKGVNLPQ
VPLKHLSSFTKKDEADLAFAFANNLDYVALSFVRSGDDVRALKAHMLQHYGRMIPVISKIEKPEAVENLNDIIRESSVIM
IARGDLGVEVPAEEVPLIQKSIIRSCIDSGTPVITATQMLESMMHNPRPTRAETNDVANAVLDGTSAVMLSGETAAGEYP
LQAVTTMARIASLVERSAAFRRQVFNQISTLDPQRKQSKTEAVGLATRELALSIGASYIACFTQSGSTARLIAKFRPSVP
IIAFSPLKEVVQYLALSWGVTPILIEPQDSVDQLLAYAPWYLKEHGLVEKGQSVVITAGVPVGSSGKTNMIKVVEIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 6e-75 41
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-74 41
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 1e-74 41
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 6e-75 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SpiBuddy_2758 YP_004248761.1 pyruvate kinase VFG0479 Protein 3e-75 41