Gene Information

Name : SpiBuddy_2663 (SpiBuddy_2663)
Accession : YP_004248668.1
Strain : Sphaerochaeta globosa Buddy
Genome accession: NC_015152
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : 2.2.1.1
Position : 2892607 - 2894601 bp
Length : 1995 bp
Strand : -
Note : SMART: transketolase-like, pyrimidine-binding domain; TIGRFAM: transketolase, bacterial-like; KEGG: vco:VC0395_0565 transketolase; PFAM: transketolase, N-terminal; transketolase-like, pyrimidine-binding domain; transketolase, C-terminal

DNA sequence :
ATGAAAACGAATCAACTTGCAGATGCAATCCGTATATTAAGTATGGATGGTGTGCAGAAAGCAAACTCTGGACACCCCGG
AGCCCCAATGGGAATGGCCGATATCGCCGAGGTTCTGTGGCGCAAAATTATGGCACACAACCCCAAGAATCCTCAGTGGG
CTAACCGTGACCGCTTTGTCCTTTCCAATGGTCACGCTTCCATGTTGCTCTATTCTCTGCTTCATTTGAGCGGCTATGAC
TTGGGTTTGGATGACCTGAAGCAGTTCAGACAGCTTCACAGCCGAACAGCCGGTCACCCTGAATATAAACTGACTCCGGG
TGTTGAGACCACTACCGGACCCCTTGGACAGGGCCTTGCCAATGCTGTTGGTATGGCTTTGGCAGAAAAAATGCTTGCTG
CCCAGTTCAACAAAGAAGGCTTTCCTGTTGTAAACCACTATACCTACACCTTCCTTGGTGACGGATGTCTTATGGAAGGT
ATCAGCCATGAGGCTGCTTCCCTTGCTGGAACCTGGAAGCTTGGAAAGCTTATTGCTATCTACGACAACAATGGCATCTC
CATCGATGGCGAAGTAAAAGGTTGGTTGACCGACGACACTGCCAAGCGCTTTGAAGCATACGGATGGCAGGTGTTCAAAG
ACATCAACGGTCATGACTCCGATGCAATCCAGAAAGTTATTTCTGCTGCCAGATATGAGACCTCCAAGCCCACGCTGATC
ATGTGCAAGACCACCATCGGCTACGGCTCCCCCAACAAGGGTGGAAAGGAATCGTGTCACGGTGCACCCCTTGGCTCCGA
TGAAGTTACTCTTGCCCGCAAGCAGCTCGGCTGGGAATACGACGAGCCGTTCTTCGTTCCCGAGGAAATCTACAAGGCAT
GGGATCAGACAGAACGGGGTGGTAAGCTTGAGCACAAGTGGAACGATCTCTTTGCTTCCTACGAGAAGGCTTATCCTGCT
GAAGCTGCTGAACTGAAGAGAAGACTCAATGGTCAGTTCCCTGCCGATTGGGAAGCTTCTTTCGACGCAGTGGTGAAGCA
GTGGCAAGCTGATAAAGTAAAGGTAGCAAGCCGCAAGGCAAGCCAAATGACCTTGGATGTATTGGGCAAGTTGTTTCCCG
AGCTCACCGGCGGTTCGGCTGACCTCTCTCCCTCCAACCTTACCCAGTGGAAGGGTGTACAGGACTTTGATGTAACAACC
GGCAAAGGCACATACCTGCGCTTTGGTGTTCGTGAGTTTGGTATGACTGCCGTTCTCAACGGCATGGCCCTTCACGGTGG
CTTCCTTACCTACGGTGCAACCTTCTTGATGTTCATGGAATATGCCCGCAATGCGCTTCGCATGTCCGCTCTCATGGGAC
TGCGCAACGTCATGGTATTCACCCATGATTCCATCGGCCTGGGCGAGGATGGTCCCACCCACCAGCCGGTCGAACAGATT
GCAAGTCTGCGCATGACTCCGAACATGACTACCTGGAGACCCTGTGATGCCGTTGAGACCGCCTGCGCTTGGAAGAGTGC
AGTCAAGCGGACCGATGGCCCGACAGCCCTGTTGCTCAGCCGCCAGAATCTGGCTCCGCAGGAGAGAACGGAAACCCAGC
TCGCTCAGATTTCCAAGGGAGCTTATACTCTCTATGAGTCTGCAGCAAAGCCGCAGGTGATTCTCATCGGAACCGGTAGT
GAAGTATCACTCGCCCTGGAAGCAGGCAAGAAACTTGCTTCCGAAGGCAAAGCTGTTCGTGTAGTCTCCATGCCCTCTCC
TGAAGTCTTTGAGAGGCAGGATGCAGCCTACAAGGAAGCCGTACTTCCAGCTTCTGTGAAAGCACGCGTTGCAGTCGAAG
CTGCCTGGACTGATTTCTGGTACAAGTATGTCGGTCTTGATGGCAAGGTCATCGGTATGCACAGCTTTGGTGAGTCCGGT
CCTGCTGAGAAGCTCTATGAGTTCTTCGGCATTACCGCTGTTAAGGTGTACGAAGCTGCAGCATCACTGCTGTAG

Protein sequence :
MKTNQLADAIRILSMDGVQKANSGHPGAPMGMADIAEVLWRKIMAHNPKNPQWANRDRFVLSNGHASMLLYSLLHLSGYD
LGLDDLKQFRQLHSRTAGHPEYKLTPGVETTTGPLGQGLANAVGMALAEKMLAAQFNKEGFPVVNHYTYTFLGDGCLMEG
ISHEAASLAGTWKLGKLIAIYDNNGISIDGEVKGWLTDDTAKRFEAYGWQVFKDINGHDSDAIQKVISAARYETSKPTLI
MCKTTIGYGSPNKGGKESCHGAPLGSDEVTLARKQLGWEYDEPFFVPEEIYKAWDQTERGGKLEHKWNDLFASYEKAYPA
EAAELKRRLNGQFPADWEASFDAVVKQWQADKVKVASRKASQMTLDVLGKLFPELTGGSADLSPSNLTQWKGVQDFDVTT
GKGTYLRFGVREFGMTAVLNGMALHGGFLTYGATFLMFMEYARNALRMSALMGLRNVMVFTHDSIGLGEDGPTHQPVEQI
ASLRMTPNMTTWRPCDAVETACAWKSAVKRTDGPTALLLSRQNLAPQERTETQLAQISKGAYTLYESAAKPQVILIGTGS
EVSLALEAGKKLASEGKAVRVVSMPSPEVFERQDAAYKEAVLPASVKARVAVEAAWTDFWYKYVGLDGKVIGMHSFGESG
PAEKLYEFFGITAVKVYEAAASLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 0.0 63
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 0.0 61