Gene Information

Name : SpiBuddy_0254 (SpiBuddy_0254)
Accession : YP_004246287.1
Strain : Sphaerochaeta globosa Buddy
Genome accession: NC_015152
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 280200 - 280796 bp
Length : 597 bp
Strand : +
Note : PFAM: Bacterial sugar transferase; KEGG: bha:BH3716 galactosyltransferase

DNA sequence : 
ATGATCTATTTAAGAATTAAAAGATTTTTTGATTTCCTACTAGCGCTTTTTGCCTTGATAGTGTTGTCTCCGTTGTTTCT
CGTAATAATCATCTTAATAAAGCTTGATTCTAAAGGTCCGGTTTTATTCAAGCAAAAGAGAGTCGGGATACATAAGACCC
ATTTTTATATCCTCAAGCTTAGGACGATGAGCATAGATACTCCAAACGATGTTCCTACCCATCAGCTCAAGAATCCTCAG
CAGTATATAACCAGGGTTGGCAAAGTCCTCAGAAAGACCAGTCTGGATGAGTTGCCACAGATCTTCAATATTCTTGCCGG
ACAGATGTCGATAATCGGGCCACGGCCTGCGCTTTGGAATCAGTATGATCTCATAGCAGAACGGGACAAATATGGAGCAA
ATGATGTGCGACCAGGATTGTCTGGTTGGGCACAAATCAACGGTAGAGATGCGCTAGAAATTGTTGATAAGGCTTGGTTC
GATGGTGAGTATGTTCAGAAGGTTGGATTTAGGATGGATGTAAAGTGCTTCTTTAAAACCATATTCAATGTACTGAACCA
TGATGGAGTTGTTGAGGGTGGGACAGGTTGTGATTGA

Protein sequence : 
MIYLRIKRFFDFLLALFALIVLSPLFLVIIILIKLDSKGPVLFKQKRVGIHKTHFYILKLRTMSIDTPNDVPTHQLKNPQ
QYITRVGKVLRKTSLDELPQIFNILAGQMSIIGPRPALWNQYDLIAERDKYGANDVRPGLSGWAQINGRDALEIVDKAWF
DGEYVQKVGFRMDVKCFFKTIFNVLNHDGVVEGGTGCD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 3e-35 49
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 2e-35 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SpiBuddy_0254 YP_004246287.1 sugar transferase VFG1369 Protein 1e-46 63
SpiBuddy_0254 YP_004246287.1 sugar transferase VFG1309 Protein 1e-36 48