Gene Information

Name : SpiBuddy_2390 (SpiBuddy_2390)
Accession : YP_004248398.1
Strain : Sphaerochaeta globosa Buddy
Genome accession: NC_015152
Putative virulence/resistance : Unknown
Product : transposase IS200-family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1943
EC number : -
Position : 2588493 - 2588912 bp
Length : 420 bp
Strand : -
Note : PFAM: transposase IS200-like; KEGG: lsl:LSL_0050 IS200 family transposase

DNA sequence :
ATGGTAGAAGAGAGTCTAGCACATACGACATGGGATTGCACGTACCACATCGTATGGATACCGAAATACCGGAGGAAGGT
CTTGTACGGCGAGTGCCGCAGGGAAGTGATAGAGGTGGTCAGGACGTTGCTGTCGAACAAGAAGATAGCAATAGTGGAAG
GGGCTGTATGTTCGGACCACATCCACCTGAGCGTACGGATACCACCGAAATACTCGGTAGCAGAGATAATGGGATATGTG
AAAGGCAAAAGCGCGTTGATGCTGTTTGACAGGCACCCGGAATGGAGGCGCCGAATAGGTCGAGACAGGAGCTTTTGGGC
AAGAGGGTACTATGTGAGCACGATTGGCTTGAACGAGGATGTGATCAAGAAGTACATCCAGAACCAAGAGGAATCGGACA
AGATAGGCGCCGACACGTGA

Protein sequence :
MVEESLAHTTWDCTYHIVWIPKYRRKVLYGECRREVIEVVRTLLSNKKIAIVEGAVCSDHIHLSVRIPPKYSVAEIMGYV
KGKSALMLFDRHPEWRRRIGRDRSFWARGYYVSTIGLNEDVIKKYIQNQEESDKIGADT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 1e-30 51
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 3e-33 50
EF0615 NP_814372.1 IS200 family transposase Not tested Not named Protein 6e-26 49
ef0123 AAM75324.1 EF0123 Not tested Not named Protein 4e-26 49
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 4e-25 47