Gene Information

Name : SpiBuddy_1403 (SpiBuddy_1403)
Accession : YP_004247422.1
Strain : Sphaerochaeta globosa Buddy
Genome accession: NC_015152
Putative virulence/resistance : Unknown
Product : S-adenosylmethionine--tRNA ribosyltransferase-isomerase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0809
EC number : -
Position : 1527064 - 1528104 bp
Length : 1041 bp
Strand : -
Note : TIGRFAM: Queuosine biosynthesis protein; HAMAP: Queuosine biosynthesis protein; KEGG: ssm:Spirs_2018 S-adenosylmethionine/tRNA-ribosyltransferase-iso merase; PFAM: Queuosine biosynthesis protein

DNA sequence :
ATGACAATCAAGGAATACTCTTTTGACCTTCCGGAGCATCTGATAGCACAGACTCCCATAGACCGACGTGGCGAGGACCG
ATTGCTGGTTCTCGACAAGCATAGTGGAACCATCATAGATGAACAAATGACACATTTTGCTTCCTATCTTCAAGAAGGAA
GTATTCTTGTTGTCAACAACAGTAAAGTGCGCAAGGCACGTGTATTTGCCATCAGCGAGACTAAAAGCCGCGTGGAATTT
CTTTTTCTGGAAGAAAACCTCGACCATAGCTGGAATGTCATGGTCACCAAAACAAAAAAACAACATGTCGGCAAGCATTA
TACATTCTGTACTGCCGACCAGAGCTATGTACGTACCGGATGCATTACTAAAGCCAATGAGGATGGGACAAGAACCATCA
CCTTCAATCATGTACTTGATGAGGATTTTTTCCTCAAGCTCGGTCATGTCCCACTCCCCCCATACATCAAGCGTGAGGAT
TGCTTTGCCGACGAGAATAGGTATCAGACAATTTATGCACAAAAGGAAGGGTCGGTAGCAGCCCCGACTGCTGGATTGCA
CTTTACCCAAGAAATCCTGGCATCCATTCGTGCAAAAGGCTGTACTATTGTTCCAGTTACCTTGCATGTTGGACCCGGAA
CCTTTTTGCCCGTTCGTACCGATAATCTGGAAGACCATCACATGCATTATGAATCGTATGAAATTGAGGAAGAAAGCGCT
CGCATCATCAACCAGGCAAAAGCGCAGGGGCGTAAGATTGTTGCCACAGGGACGACCAGCGTGCGCACTCTGGAGAGTGC
TTTCAACACTGAAACAGGGTTATTGGAAAGCGGGCAAGGTCGGACAAATCTCTTTATCCGACCTCCTTATACGTTTAAAA
TCGTGGACCAACTGTTGACGAACTTTCATACTCCGGAATCGACACTCTTGGTCTTGGTCTCCACGTTCGCAGGAAAAGAA
AAGATTGATCGCGCCTATCGGCATGCAGTCGAACAATCCTATCGTTTCTTCAGCTATGGTGATGCAATGTTTATTTGCTG
A

Protein sequence :
MTIKEYSFDLPEHLIAQTPIDRRGEDRLLVLDKHSGTIIDEQMTHFASYLQEGSILVVNNSKVRKARVFAISETKSRVEF
LFLEENLDHSWNVMVTKTKKQHVGKHYTFCTADQSYVRTGCITKANEDGTRTITFNHVLDEDFFLKLGHVPLPPYIKRED
CFADENRYQTIYAQKEGSVAAPTAGLHFTQEILASIRAKGCTIVPVTLHVGPGTFLPVRTDNLEDHHMHYESYEIEEESA
RIINQAKAQGRKIVATGTTSVRTLESAFNTETGLLESGQGRTNLFIRPPYTFKIVDQLLTNFHTPESTLLVLVSTFAGKE
KIDRAYRHAVEQSYRFFSYGDAMFIC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
queA AAT96070.1 QueA Not tested T-PAI Protein 3e-58 44
queA AAT96106.1 QueA Not tested T-PAI Protein 2e-58 43
queA AAF71483.1 QueA Not tested Hrp PAI Protein 2e-59 43
queA AAT96122.1 QueA Not tested T-PAI Protein 2e-59 43
queA AAT96182.1 QueA Not tested T-PAI Protein 4e-57 43
queA AAT96042.1 QueA Not tested T-PAI Protein 3e-58 43
queA AAF71490.1 QueA Not tested Hrp PAI Protein 2e-57 42