Gene Information

Name : SpiBuddy_0126 (SpiBuddy_0126)
Accession : YP_004246164.1
Strain : Sphaerochaeta globosa Buddy
Genome accession: NC_015152
Putative virulence/resistance : Resistance
Product : cadmium resistance transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4300
EC number : -
Position : 146564 - 147169 bp
Length : 606 bp
Strand : -
Note : PFAM: Cadmium resistance transporter; KEGG: lcr:LCRIS_00180 cadmium resistance transporter

DNA sequence :

ATGATGCACATGCAATCAGTTGTACTCTCTGCAATCGTAGTCTTCATCTCCACCAGCATCGATGACCTGGTACTTCTCAT
CCTCTTTCATGCACAGGCAAAGACCCGCGCCCAGCGCGCATCGATTCTTGCAGGCCAGATACTGGGTATCGGGATGTTGG
TAGCCATCAGTCTGTTGGGCTCATACCTTGCGAGCAGAATGCTCGAAGGATGGGTTATAGGTCTTCTGGGCTTTATTCCC
ATCATATTGGGAATAAAGGCGATGATGAGCAAGGATGTGGAGAAAAACGAGACTACGACAATCAAAGCGAAAAGCCTCTT
TGCGACCGTCACCTTGGTGACCATCGCAAGCGGAGGGGACAACCTGGGTATCTACATACCCTGGTTTGTCACCCTCGACT
CCGCCTCAGTTATGGTGACGATGGTTGTATTTCTTGCCCTCATCCTGCTCTTTTGGGCCCTGGGATACCTCTTGGCAAAC
CAGAGCCATATAAAAGCACTGCTCTCCCGCTTCTCAACGGTACTGGTACCGGTGGTCTTTCTCGTGCTTGGATTGGTCAT
CCTCAGCGAGAACGGAACCTTTGCGAAGCTGGCAAGCTTGTTCTAG

Protein sequence :

MMHMQSVVLSAIVVFISTSIDDLVLLILFHAQAKTRAQRASILAGQILGIGMLVAISLLGSYLASRMLEGWVIGLLGFIP
IILGIKAMMSKDVEKNETTTIKAKSLFATVTLVTIASGGDNLGIYIPWFVTLDSASVMVTMVVFLALILLFWALGYLLAN
QSHIKALLSRFSTVLVPVVFLVLGLVILSENGTFAKLASLF

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
cadD	YP_252014.1	cadmium binding protein CadD	Not tested	SCCmec	Protein	1e-14	42

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
SpiBuddy_0126	YP_004246164.1	cadmium resistance transporter	BAC0057	Protein	2e-14	42