Gene Information

Name : Asphe3_40380 (Asphe3_40380)
Accession : YP_004243247.1
Strain :
Genome accession: NC_015146
Putative virulence/resistance : Virulence
Product : site-specific recombinase, DNA invertase Pin
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 54103 - 54705 bp
Length : 603 bp
Strand : +
Note : PFAM: Resolvase, N terminal domain; Helix-turn-helix domain of resolvase

DNA sequence : 
ATGGTGGGTCAGCGTATTGGGTACGTACGCGTGAGCACGCTGGACCAGAACGAGAAACGCCAGCTCGAGGGCCAGGTTCT
GGACCGGGTCTTCACGGACAAGGCTTCGGGCCGTGACACTGCCCGGCCGGAGCTCACGGAAATGCTGCGGTTCGCCCGTG
ACGGGGACACCGTGGTGGTGCACAGCATGGACCGGCTGGCCCGCAACCTCGATGACCTGCGGGCCCTCGTCCAAGGCCTA
ACCCGCAAAGGCGTGCGGGTGGAATTCACCAAAGAGAGCCTGGTCTTCAGCGGTGAAGACTCCCCCATGGCCAACCTCAT
GCTGTCCGTCATGGGTGCGTTCGCCGAATTCGAACGCTCCCTCATCAGGGAACGCCAGCGGGAAGGCATCGCTTTGGCCA
AGCAGCGCGGCGCCTACAAAGGACGGAAGAAGACCCTCACACCGGAGCGGGCAGCCGAACTTGTCCAACGCGCCGGCACC
GGTGTTCCGAAAGCACTTCTTGCCCGTGACTACGGGATCAGCAGGGAGACCGTCTACCAGTACCTCCGCAACGCCAAGCC
ATCGGGAACCCTCTCCCCAGCCGCGCCACCTCTCTTGCCGTAG

Protein sequence : 
MVGQRIGYVRVSTLDQNEKRQLEGQVLDRVFTDKASGRDTARPELTEMLRFARDGDTVVVHSMDRLARNLDDLRALVQGL
TRKGVRVEFTKESLVFSGEDSPMANLMLSVMGAFAEFERSLIRERQREGIALAKQRGAYKGRKKTLTPERAAELVQRAGT
GVPKALLARDYGISRETVYQYLRNAKPSGTLSPAAPPLLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 5e-57 75
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 4e-57 75
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 3e-57 73
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 5e-57 73
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 3e-57 73
res YP_005124341.1 DNA-invertase Not tested Not named Protein 5e-25 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Asphe3_40380 YP_004243247.1 site-specific recombinase, DNA invertase Pin VFG1030 Protein 1e-57 73