Gene Information

Name : Asphe3_37760 (Asphe3_37760)
Accession : YP_004242999.1
Strain : Arthrobacter phenanthrenivorans Sphe3
Genome accession: NC_015145
Putative virulence/resistance : Virulence
Product : ABC-type cobalamin/Fe3+-siderophore transporter, ATPase component
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 4024272 - 4025087 bp
Length : 816 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
GTGGCAGTTCTCAACGCCAAGGACCTGACGCTGAAGTACGATCAGCGCTGCGTGGTGGACGGACTCACCGCCGAGATCCC
CGAGGGCAAGGTGACCATGATCGTGGGCGCCAACGCCTGCGGTAAATCGACCCTCCTCCGCGGCCTGTCCCGGCTCCTGA
AACCCGCGGCCGGCGCAGTGACCCTCGATGGCAAGGACATCCACTCCCGTCCCGCGCGCGAGCTGGCCCGCACCCTGGGC
CTCCTCCCGCAGCACCCCACCGCCCCGGACGGCATCACGGTCCGGGACCTGGTGGGCCGCGGCCGCTACCCGCACCAAGG
CTTCTTCCGCAGCTGGAGCGAAAAGGACGACGCCGCCGTGCAGCGCGCGCTTGAGGCTACGGACACACTGGCCCTGGCAG
GGCGGAACGTCGATGAACTGTCCGGAGGGCAGCGGCAGCGGGTGTGGATAGCGATGGCCCTGGCACAGGAGACCGACGTG
CTGCTGCTGGACGAGCCCACCACCTATCTGGATCTGGCGCACCAGGTGGAGGTCCTGGACCTGGTGACGGACCTGAACCG
CCGGCGCGGCACCACCGTGGCCATCGTCCTGCATGACTTGAACCTCGCCGCCCGTTATGCGGACAACGTCATCGCCATGA
AGAGCGGCGCCGTGGTGGCTGTGGGTTCCCCGCTCGAAGTGGTCACCGAAAGCCTGGTGCGCGATGTCTTCGGCCTCGAA
TCCCGCGTCATTCCCGATCCGGTGTCCGGAACACCCCTGATCATTCCCATCGGACGCCACCACATCCCCGTCAACGAACT
GGAGCTCGTTTCATGA

Protein sequence : 
MAVLNAKDLTLKYDQRCVVDGLTAEIPEGKVTMIVGANACGKSTLLRGLSRLLKPAAGAVTLDGKDIHSRPARELARTLG
LLPQHPTAPDGITVRDLVGRGRYPHQGFFRSWSEKDDAAVQRALEATDTLALAGRNVDELSGGQRQRVWIAMALAQETDV
LLLDEPTTYLDLAHQVEVLDLVTDLNRRRGTTVAIVLHDLNLAARYADNVIAMKSGAVVAVGSPLEVVTESLVRDVFGLE
SRVIPDPVSGTPLIIPIGRHHIPVNELELVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-67 56
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-68 50
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-68 50
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 6e-52 49
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-52 46
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-57 46
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 9e-57 46
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 8e-57 46
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-57 46
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 5e-37 44
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-52 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-52 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-52 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-52 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Asphe3_37760 YP_004242999.1 ABC-type cobalamin/Fe3+-siderophore transporter, ATPase component BAC0164 Protein 4e-52 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Asphe3_37760 YP_004242999.1 ABC-type cobalamin/Fe3+-siderophore transporter, ATPase component VFG0925 Protein 1e-70 55
Asphe3_37760 YP_004242999.1 ABC-type cobalamin/Fe3+-siderophore transporter, ATPase component VFG1042 Protein 3e-52 49