Gene Information

Name : Asphe3_35980 (Asphe3_35980)
Accession : YP_004242833.1
Strain : Arthrobacter phenanthrenivorans Sphe3
Genome accession: NC_015145
Putative virulence/resistance : Virulence
Product : chaperone ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 3826806 - 3829448 bp
Length : 2643 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB

DNA sequence :
TTGGACGTCAAATTCACCACCAAGAGCCAGGAGGCTCTTTCGGCTGCGGCCATGAACGCCTCCACCGCAGGCAATCCGCA
GGTGGAGCCCGCGCACCTGCTCAAGGCGCTGATGGACCAGCGCGAGGGCGTGGCTGTTGCCCTGCTGCGTGCCACCGGCG
CCGATCCCGATTCCGTCAGCGTGCAGGCAAGCAGCGCCATCAAGGCCCTGCCGGCCACCTCCGGCGGTTCCAGTCAGCAG
GCGCAGCTTTCGCGGCCTGCGCTGCAGGCCATCCAGAATGCCAAGGAAGAGGCGGACCGGCTCGGTGATACCTTCGTCTC
CACGGAGGTCCTCCTGCTCGGCATCTCGGCCGGCAACGACGCTGCCGCCCGCCTGCTGCGTGATGCCGGCGCCTCCCACG
AAGCGCTCCGCGCCGCCCTGCCGGGTGTCCGCGGCGACCGCAAAGTGGACAGCCAGGATCCGGAAAACACCTTCCAGGCA
CTGGAGAAGTACGGCACGGACCTCACCGCGATGGCCCGCGCGGGCAAGCTGGATCCGGTCATCGGCCGGGATTCAGAAAT
CCGGCGCGTGGTCCAGGTCCTGTCCCGGCGCACCAAGAACAACCCTGTGCTCATCGGTGAACCGGGCGTTGGCAAGACCG
CCGTGGTGGAAGGGCTGGCACAGCGGATGGTGGCCGGCGACGTCCCGGAGAGCCTGCGCGGCAAGACGCTCATCTCCCTG
GACCTCGGCTCCATGGTTGCGGGCGCAAAATACCGCGGTGAGTTCGAGGAGCGGTTGAAGGCAGTCCTCGAGGAAATCAA
GGGCTCTGAAGGCCAGATCGTCACCTTCATCGACGAGATCCATACCGTGGTGGGGGCCGGTGCCACCGGTGATTCCTCCA
TGGATGCCGGCAACATGCTCAAGCCCATGCTGGCCCGGGGCGAGCTGCGCCTGATCGGCGCCACCACCCTTGATGAGTAC
CGCGAAAACATCGAGAAGGACGCGGCCCTGGAACGCCGCTTCCAACAGGTGTACGTGGGCGAGCCCAGCGTGGAGGACAC
CATCGGCATCCTCCGCGGCCTCAAGGAACGCTACGAGGCACACCACAAGGTGTCCATCGCGGACTCCGCCCTGGTGGCCG
CGGCCACGCTGTCCAACCGCTACATCTCCGGGCGCCAGTTGCCGGACAAGGCTATCGACCTCGTGGATGAGGCCGCGTCC
CGCCTGCGGATGGAGATCGACTCCGCGCCGGAGGAGATTGACCAGCTGCGGCGCCAGGTGGACCGGCTCACCATGGAAGA
GCTGGCGCTGGAGGGCGAGACCGACGCGGCGTCCGTGGAGCGGCTGGCTGCGCTCCGCGCCGACAAGGCGGACAAGGAAG
AGGAACTCTCCGCCCTGAACGCGCGCTGGGAGGCTGAAAAGGCCGGCCTTAACCGGGTGGGCGACCTCAAGGCCAAGCTC
GACGAGCTGCGCTCCGCCGCGGACAAGGCACAGCGCGAGGGTGACCTGGAGACGGCCTCACGCGTTCTGTACGGGGAGAT
TCCGGCGCTCGAACGCGAGCTGAACGCCGCTGCCGAAGCGGAAGCCGCAGTGACAGACAAGCCCGCCCAGATGGTGGCCG
AGGAAGTCACGGCCGAGGACATCGCCGAAGTGATCTCCGCCTGGACCGGCATTCCCGCCGGCCGCATGCTGCAAGGCGAG
AGCCAGAAGCTGCTGCACATGGAGGAGGAACTCGGCAAGCGGCTGATCGGCCAGACCAAGGCTGTCACGGCAGTTTCCGA
CGCCGTGCGGCGCGCCCGGGCCGGCATCAGTGACCCTAACCGCCCCACCGGTTCGTTCCTCTTCCTGGGCCCCACCGGCG
TCGGTAAGACCGAGCTGGCCAAAGCCCTGGCGGACTTCCTGTTCGACGACGAACGCGCCATGGTGCGGATCGACATGTCC
GAGTACAGCGAGAAGCACAGCGTGGCCCGGCTGGTGGGTGCGCCCCCGGGCTACGTGGGCTACGAGGAGGGCGGCCAGCT
GACTGAAGCGGTCCGCCGTCGTCCGTACTCGGTGGTGCTGCTGGACGAGGTGGAGAAGGCCCACCCGGAGGTGTTCGACA
TCCTCCTGCAGGTGCTCGACGACGGCCGCCTCACCGACGGCCAGGGCCGTACCGTGGATTTCCGCAACGTGATCCTGGTG
CTGACCTCCAACCTCGGCAGCCAGTTCCTGGTGGACCAGACGCTGGACGCCGAAGCCAAGCGGAACGCGGTCATGGCCAC
CGTCAACGCCTCCTTCAAGCCCGAGTTCCTGAACCGGCTGGACGAAGTGGTGCTGTTCGATGCCCTGAGCGTCGAAGAGC
TGGCCCATATCGTCGAGCTGCATGTGGCGGAGCTGGGGCGGCGGCTGTACGAGCGGAGGCTCAGCCTGGAAGTCACCGAC
GGCGCCAAAGCCTGGCTCGCCCTGTCCGGCTACGACCCCGCCTACGGCGCCCGGCCGCTGCGCCGCCTGGTCCAGCGCGA
GATCGGGGACCGGCTCGCCAAGGCCATCCTGGCCGGGGAGATCAGCGACGGCGACACGGTGCTGGTGGACACGGCGGCAG
ACCTGGGTGAGCTTTCCGGGGGTGGCGTGGACGCCCTCACGGGCGTGCCGACGTCGGGTCTGTCAGTTCGGCGGAAGGCC
TAA

Protein sequence :
MDVKFTTKSQEALSAAAMNASTAGNPQVEPAHLLKALMDQREGVAVALLRATGADPDSVSVQASSAIKALPATSGGSSQQ
AQLSRPALQAIQNAKEEADRLGDTFVSTEVLLLGISAGNDAAARLLRDAGASHEALRAALPGVRGDRKVDSQDPENTFQA
LEKYGTDLTAMARAGKLDPVIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRMVAGDVPESLRGKTLISL
DLGSMVAGAKYRGEFEERLKAVLEEIKGSEGQIVTFIDEIHTVVGAGATGDSSMDAGNMLKPMLARGELRLIGATTLDEY
RENIEKDAALERRFQQVYVGEPSVEDTIGILRGLKERYEAHHKVSIADSALVAAATLSNRYISGRQLPDKAIDLVDEAAS
RLRMEIDSAPEEIDQLRRQVDRLTMEELALEGETDAASVERLAALRADKADKEEELSALNARWEAEKAGLNRVGDLKAKL
DELRSAADKAQREGDLETASRVLYGEIPALERELNAAAEAEAAVTDKPAQMVAEEVTAEDIAEVISAWTGIPAGRMLQGE
SQKLLHMEEELGKRLIGQTKAVTAVSDAVRRARAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMS
EYSEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNVILV
LTSNLGSQFLVDQTLDAEAKRNAVMATVNASFKPEFLNRLDEVVLFDALSVEELAHIVELHVAELGRRLYERRLSLEVTD
GAKAWLALSGYDPAYGARPLRRLVQREIGDRLAKAILAGEISDGDTVLVDTAADLGELSGGGVDALTGVPTSGLSVRRKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 6e-108 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Asphe3_35980 YP_004242833.1 chaperone ATPase VFG2084 Protein 5e-116 45
Asphe3_35980 YP_004242833.1 chaperone ATPase VFG2076 Protein 2e-116 44